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7CRR

Native NSD3 bound to 187-bp nucleosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(M, E)
Histone H3polymer13515223.82UniProt (Q92133)
Pfam (PF00125)
Xenopus laevis (African clawed frog)
2B, F
(B, F)
Histone H4polymer10211263.22UniProt (P62799)
Pfam (PF15511)
Xenopus laevis (African clawed frog)
3C, G
(C, G)
Histone H2Apolymer12913978.22UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
Xenopus laevis (African clawed frog)
4D, H
(D, H)
Histone H2Bpolymer12213524.82UniProt (Q6AZK7)
Pfam (PF00125)
UniProt (by SIFTS) (P02281)
Xenopus tropicalis (Western clawed frog)
5I
(A)
DNA (168-MER)polymer18757488.61synthetic construct
6J
(K)
DNA(168-MER)polymer18757982.91synthetic construct
7K
(I)
Histone-lysine N-methyltransferase NSD3polymer75885484.31UniProt (Q9BZ95)
Pfam (PF17907)
Pfam (PF00856)
Pfam (PF17982)
Pfam (PF23011)
Pfam (PF22908)
Pfam (PF23004)
Pfam (PF00855)
Homo sapiens (Human)Nuclear SET domain-containing protein 3,Protein whistle,WHSC1-like 1 isoform 9 with methyltransferase activity to lysine,Wolf-Hirschhorn syndrome candidate 1-like protein 1,WHSC1-like protein 1
8L
(I)
S-ADENOSYLMETHIONINEnon-polymer398.41Chemie (SAM)
9M, N, O
(I)
ZINC IONnon-polymer65.43Chemie (ZN)
Sequence modifications
M, E: 1 - 135 (UniProt: Q92133)
PDBExternal DatabaseDetails
Nle 36Lys 37engineered mutation
Nle 90Met 91engineered mutation
Nle 120Met 121engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight308935.8
Non-Polymers*Number of molecules4
Total formula weight594.7
All*Total formula weight309530.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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