7CRR
Native NSD3 bound to 187-bp nucleosome
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E (M, E) | Histone H3 | polymer | 135 | 15223.8 | 2 | UniProt (Q92133) Pfam (PF00125) | Xenopus laevis (African clawed frog) | |
2 | B, F (B, F) | Histone H4 | polymer | 102 | 11263.2 | 2 | UniProt (P62799) Pfam (PF15511) | Xenopus laevis (African clawed frog) | |
3 | C, G (C, G) | Histone H2A | polymer | 129 | 13978.2 | 2 | UniProt (Q6AZJ8) Pfam (PF00125) Pfam (PF16211) UniProt (by SIFTS) (P06897) | Xenopus laevis (African clawed frog) | |
4 | D, H (D, H) | Histone H2B | polymer | 122 | 13524.8 | 2 | UniProt (Q6AZK7) Pfam (PF00125) UniProt (by SIFTS) (P02281) | Xenopus tropicalis (Western clawed frog) | |
5 | I (A) | DNA (168-MER) | polymer | 187 | 57488.6 | 1 | synthetic construct | ||
6 | J (K) | DNA(168-MER) | polymer | 187 | 57982.9 | 1 | synthetic construct | ||
7 | K (I) | Histone-lysine N-methyltransferase NSD3 | polymer | 758 | 85484.3 | 1 | UniProt (Q9BZ95) Pfam (PF17907) Pfam (PF00856) Pfam (PF17982) Pfam (PF23011) Pfam (PF22908) Pfam (PF23004) Pfam (PF00855) | Homo sapiens (Human) | Nuclear SET domain-containing protein 3,Protein whistle,WHSC1-like 1 isoform 9 with methyltransferase activity to lysine,Wolf-Hirschhorn syndrome candidate 1-like protein 1,WHSC1-like protein 1 |
8 | L (I) | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) | |||
9 | M, N, O (I) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) |
Sequence modifications
M, E: 1 - 135 (UniProt: Q92133)
PDB | External Database | Details |
---|---|---|
Nle 36 | Lys 37 | engineered mutation |
Nle 90 | Met 91 | engineered mutation |
Nle 120 | Met 121 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 308935.8 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 594.7 | |
All* | Total formula weight | 309530.5 |