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7CPV

Cryo-EM structure of 80S ribosome from mouse testis

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(LA)
60S ribosomal protein L8polymer25728088.91UniProt (P62918)
Pfam (PF00181)
Pfam (PF03947)
Mus musculus (Mouse)
2B
(LB)
60S ribosomal protein L3polymer40346212.11UniProt (P27659)
Pfam (PF00297)
Mus musculus (Mouse)J1 protein
3C
(LC)
60S ribosomal protein L4polymer41947259.91UniProt (Q9D8E6)
Pfam (PF00573)
Pfam (PF14374)
Mus musculus (Mouse)
4D
(LD)
60S ribosomal protein L5polymer29734464.81UniProt (P47962)
Pfam (PF17144)
Pfam (PF14204)
Mus musculus (Mouse)
5E
(LE)
60S ribosomal protein L6polymer29633593.91UniProt (P47911)
Pfam (PF03868)
Pfam (PF01159)
Mus musculus (Mouse)TAX-responsive enhancer element-binding protein 107,TAXREB107
6F
(LF)
60S ribosomal protein L7polymer27031492.91UniProt (P14148)
Pfam (PF08079)
Pfam (PF00327)
Mus musculus (Mouse)
7G
(LG)
60S ribosomal protein L7apolymer26630042.71UniProt (P12970)
Pfam (PF01248)
Mus musculus (Mouse)Surfeit locus protein 3
8H
(LH)
60S ribosomal protein L9polymer19221917.51UniProt (P51410)
Pfam (PF00347)
Mus musculus (Mouse)
9I
(LI)
60S ribosomal protein L10-likepolymer21424612.01UniProt (P86048)
Pfam (PF00252)
Mus musculus (Mouse)
10J
(LJ)
60S ribosomal protein L11polymer17820288.51UniProt (Q9CXW4)
Pfam (PF00281)
Pfam (PF00673)
Mus musculus (Mouse)
11K
(LL)
60S ribosomal protein L13polymer21124364.71UniProt (P47963)
Pfam (PF01294)
Mus musculus (Mouse)A52
12L
(LM)
60S ribosomal protein L14polymer21723620.31UniProt (Q9CR57)
Pfam (PF01929)
Mus musculus (Mouse)
13M
(LN)
60S ribosomal protein L15polymer20424207.31UniProt (Q9CZM2)
Pfam (PF00827)
Mus musculus (Mouse)
14N
(LO)
60S ribosomal protein L13apolymer20323519.41UniProt (P19253)
Pfam (PF00572)
Mus musculus (Mouse)Transplantation antigen P198,Tum-P198 antigen
15O
(LP)
60S ribosomal protein L17polymer18421444.21UniProt (Q6ZWZ7)
Pfam (PF00237)
UniProt (by SIFTS) (Q9CPR4)
Mus musculus (Mouse)
16P
(LQ)
60S ribosomal protein L18polymer18821698.71UniProt (P35980)
Pfam (PF17135)
Mus musculus (Mouse)
17Q
(LR)
60S ribosomal protein L19polymer19623535.31UniProt (P84099)
Pfam (PF01280)
Mus musculus (Mouse)60S ribosomal protein L19 isoform 1
18R
(LS)
60S ribosomal protein L18apolymer17620778.51UniProt (P62717)
Pfam (PF01775)
Mus musculus (Mouse)
19S
(LT)
60S ribosomal protein L21polymer16018624.01UniProt (Q9CQM8)
Pfam (PF01157)
UniProt (by SIFTS) (O09167)
Mus musculus (Mouse)
20T
(LU)
60S ribosomal protein L22polymer12814785.01UniProt (P67984)
Pfam (PF01776)
Mus musculus (Mouse)60S ribosomal protein L22 isoform a,Heparin-binding protein HBp15
21U
(LV)
60S ribosomal protein L23polymer14014892.51UniProt (P62830)
Pfam (PF00238)
Mus musculus (Mouse)
22V
(LW)
60S ribosomal protein L24polymer15717825.11UniProt (Q8BP67)
Pfam (PF01246)
Mus musculus (Mouse)
23W
(LX)
60S ribosomal protein L23apolymer15617740.21UniProt (P62751)
Pfam (PF03939)
Pfam (PF00276)
Mus musculus (Mouse)
24X
(LY)
60S ribosomal protein L26polymer14517303.41UniProt (P61255)
Pfam (PF16906)
Pfam (PF00467)
Mus musculus (Mouse)Silica-induced gene 20 protein,SIG-20
25Y
(LZ)
60S ribosomal protein L27polymer13615835.81UniProt (P61358)
Pfam (PF00467)
Pfam (PF01777)
Mus musculus (Mouse)
26Z
(La)
60S ribosomal protein L27apolymer14816648.61UniProt (P14115)
Pfam (PF00828)
Mus musculus (Mouse)L29
27AA
(Lb)
60S ribosomal protein L29polymer16017635.21UniProt (P47915)
Pfam (PF01779)
Mus musculus (Mouse)
28BA
(Lc)
60S ribosomal protein L30polymer11512805.11UniProt (P62889)
Pfam (PF01248)
Mus musculus (Mouse)
29CA
(Ld)
60S ribosomal protein L31polymer12514494.91UniProt (P62900)
Pfam (PF01198)
Mus musculus (Mouse)
30DA
(Le)
60S ribosomal protein L32polymer13515898.91UniProt (P62911)
Pfam (PF01655)
Mus musculus (Mouse)
31EA
(Lf)
60S ribosomal protein L35apolymer11012580.81UniProt (O55142)
Pfam (PF01247)
Mus musculus (Mouse)
32FA
(Lg)
60S ribosomal protein L34polymer11713325.01UniProt (Q9D1R9)
Pfam (PF01199)
Mus musculus (Mouse)
33GA
(Lh)
60S ribosomal protein L35polymer12314595.71UniProt (Q6ZWV7)
Pfam (PF00831)
Mus musculus (Mouse)
34HA
(Li)
60S ribosomal protein L36polymer10512290.91UniProt (Q6ZWZ4)
Pfam (PF01158)
UniProt (by SIFTS) (P47964)
Mus musculus (Mouse)
35IA
(Lj)
60S ribosomal protein L37polymer9711111.01UniProt (Q9D823)
Pfam (PF01907)
Mus musculus (Mouse)
36JA
(Lk)
60S ribosomal protein L38polymer708224.91UniProt (Q9JJI8)
Pfam (PF01781)
Mus musculus (Mouse)
37KA
(Ll)
Ribosomal protein L39-likepolymer516355.71UniProt (Q9CQD0)
Pfam (PF00832)
Mus musculus (Mouse)
38LA
(Lm)
Ubiquitin-60S ribosomal protein L40polymer12814758.41UniProt (P62984)
Pfam (PF00240)
Pfam (PF01020)
Mus musculus (Mouse)Ubiquitin A-52 residue ribosomal protein fusion product 1
39MA
(Ln)
60S ribosomal protein L41polymer253473.51UniProt (P62947)
Pfam (PF05162)
Mus musculus (Mouse)
40NA
(Lo)
60S ribosomal protein L36apolymer10612477.01UniProt (P83882)
Pfam (PF00935)
Mus musculus (Mouse)60S ribosomal protein L36a-like,60S ribosomal protein L44
41OA
(Lp)
60S ribosomal protein L37apolymer9210299.41UniProt (P61514)
Pfam (PF01780)
Mus musculus (Mouse)
42PA
(Lr)
60S ribosomal protein L28polymer13715770.61UniProt (P41105)
Pfam (PF01778)
Mus musculus (Mouse)
43QA
(L5)
Mus musculus 28S ribosomal RNApolymer47311530907.41Mus musculus (Mouse)
44RA
(L7)
Mus musculus 5S ribosomal RNApolymer12038691.91GenBank (396138)Mus musculus (Mouse)
45SA
(L8)
Mus musculus 5.8S ribosomal RNApolymer15850795.01GenBank (1059793825)Mus musculus (Mouse)
46TA
(S2)
Mus musculus 18S ribosomal RNApolymer1870603101.91Mus musculus (Mouse)
47UA
(SA)
40S ribosomal protein SApolymer29532867.91UniProt (P14206)
Pfam (PF00318)
Pfam (PF16122)
Mus musculus (Mouse)37 kDa laminin receptor precursor,37LRP,37 kDa oncofetal antigen,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,OFA/iLRP
48VA
(SB)
40S ribosomal protein S3apolymer26429942.01UniProt (P97351)
Pfam (PF01015)
Mus musculus (Mouse)Protein TU-11
49WA
(SD)
40S ribosomal protein S3polymer24326715.31UniProt (P62908)
Pfam (PF07650)
Pfam (PF00189)
Mus musculus (Mouse)
50XA
(SE)
40S ribosomal protein S4, X isoformpolymer26329654.91UniProt (P62702)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
Mus musculus (Mouse)
51YA
(SF)
40S ribosomal protein S5polymer20422913.51UniProt (Q91V55)
Pfam (PF00177)
UniProt (by SIFTS) (P97461)
Mus musculus (Mouse)Ribosomal protein S5
52ZA
(SH)
40S ribosomal protein S7polymer19422168.91UniProt (P62082)
Pfam (PF01251)
Mus musculus (Mouse)
53AB
(SI)
40S ribosomal protein S8polymer20824263.41UniProt (P62242)
Pfam (PF01201)
Mus musculus (Mouse)
54BB
(SK)
40S ribosomal protein S10polymer16518951.81UniProt (P63325)
Pfam (PF03501)
Mus musculus (Mouse)
55CB
(SL)
40S ribosomal protein S11polymer15818468.81UniProt (P62281)
Pfam (PF16205)
Pfam (PF00366)
Mus musculus (Mouse)
56DB
(SP)
40S ribosomal protein S15polymer14517076.21UniProt (P62843)
Pfam (PF00203)
Mus musculus (Mouse)RIG protein
57EB
(SQ)
40S ribosomal protein S16polymer14616477.41UniProt (P14131)
Pfam (PF00380)
Mus musculus (Mouse)
58FB
(SR)
40S ribosomal protein S17polymer13515552.11UniProt (P63276)
Pfam (PF00833)
Mus musculus (Mouse)
59GB
(SS)
40S ribosomal protein S18polymer15217759.81UniProt (P62270)
Pfam (PF00416)
Mus musculus (Mouse)Ke-3,Ke3
60HB
(ST)
40S ribosomal protein S19polymer14516117.61UniProt (Q9CZX8)
Pfam (PF01090)
Mus musculus (Mouse)
61IB
(SU)
40S ribosomal protein S20polymer11913398.81UniProt (P60867)
Pfam (PF00338)
Mus musculus (Mouse)
62JB
(SV)
40S ribosomal protein S21polymer839154.41UniProt (Q9CQR2)
Pfam (PF01249)
Mus musculus (Mouse)
63KB
(SX)
40S ribosomal protein S23polymer14315844.71UniProt (P62267)
Pfam (PF00164)
Mus musculus (Mouse)
64LB
(Sa)
40S ribosomal protein S26polymer11513047.51UniProt (P62855)
Pfam (PF01283)
Mus musculus (Mouse)
65MB
(Sc)
40S ribosomal protein S28polymer697855.11UniProt (P62858)
Pfam (PF01200)
Mus musculus (Mouse)
66NB
(Sd)
40S ribosomal protein S29polymer566690.81UniProt (P62274)
Pfam (PF00253)
Mus musculus (Mouse)
67OB
(Sg)
Receptor of activated protein C kinase 1polymer31735115.71UniProt (P68040)
Pfam (PF00400)
Mus musculus (Mouse)12-3,Guanine nucleotide-binding protein subunit beta-2-like 1,Receptor for activated C kinase,Receptor of activated protein kinase C 1,p205
68PB
(SC)
40S ribosomal protein S2polymer29331283.41UniProt (P25444)
Pfam (PF00333)
Pfam (PF03719)
Mus musculus (Mouse)40S ribosomal protein S4,Protein LLRep3
69QB
(SG)
40S ribosomal protein S6polymer24928751.91UniProt (P62754)
Pfam (PF01092)
Mus musculus (Mouse)Phosphoprotein NP33
70RB
(SJ)
40S ribosomal protein S9polymer19422641.61UniProt (Q6ZWN5)
Pfam (PF00163)
Pfam (PF01479)
Mus musculus (Mouse)
71SB
(SN)
40S ribosomal protein S13polymer15117259.41UniProt (P62301)
Pfam (PF08069)
Pfam (PF00312)
Mus musculus (Mouse)
72TB
(SO)
40S ribosomal protein S14polymer15116302.81UniProt (P62264)
Pfam (PF00411)
Mus musculus (Mouse)
73UB
(SW)
40S ribosomal protein S15apolymer13014865.61UniProt (P62245)
Pfam (PF00410)
Mus musculus (Mouse)
74VB
(SY)
40S ribosomal protein S24polymer13315463.31UniProt (P62849)
Pfam (PF01282)
Mus musculus (Mouse)
75WB
(SZ)
40S ribosomal protein S25polymer12513776.21UniProt (P62852)
Pfam (PF03297)
Mus musculus (Mouse)
76XB
(Sb)
40S ribosomal protein S27polymer849480.21UniProt (Q6ZWU9)
Pfam (PF01667)
Mus musculus (Mouse)
77YB
(Se)
40S ribosomal protein S30polymer13314441.71UniProt (Q642K5)
Pfam (PF00240)
Pfam (PF04758)
UniProt (by SIFTS) (P62862)
Mus musculus (Mouse)
78ZB
(S6)
Met-tRNApolymer7524231.51Mus musculus (Mouse)
79AC, AD, AE, AF, AG...
(LN, L5, S2, LP, LT...)
MAGNESIUM IONnon-polymer24.3247Chemie (MG)
80GC, HC, IC, JC, KC...
(Lg, Lj, Lm, Lo, Lp...)
ZINC IONnon-polymer65.47Chemie (ZN)
81AM, UL, VL, WL, XL...
(S2, LB, LH, LI, LN...)
waterwater18.015Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains78
Total formula weight3672923.3
Non-Polymers*Number of molecules254
Total formula weight6461.2
All*Total formula weight3679384.5
*Water molecules are not included.

247536

PDB entries from 2026-01-14

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