Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7CPU

Cryo-EM structure of 80S ribosome from mouse kidney

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1LA60S ribosomal protein L8polymer25728088.91UniProt (P62918)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Mus musculus (house mouse)
2SA40S ribosomal protein SApolymer29532867.91UniProt (P14206)
Pfam (PF00318)
Pfam (PF16122)
In PDB
Mus musculus (house mouse)37 kDa laminin receptor precursor,37LRP,37 kDa oncofetal antigen,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,OFA/iLRP
3LB60S ribosomal protein L3polymer40346212.11UniProt (P27659)
Pfam (PF00297)
In PDB
Mus musculus (house mouse)J1 protein
4SB40S ribosomal protein S3apolymer26429942.01UniProt (P97351)
Pfam (PF01015)
In PDB
Mus musculus (house mouse)Protein TU-11
5LC60S ribosomal protein L4polymer41947259.91UniProt (Q9D8E6)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Mus musculus (house mouse)
6LD60S ribosomal protein L5polymer29734464.81UniProt (P47962)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Mus musculus (house mouse)
7LE60S ribosomal protein L6polymer29633593.91UniProt (P47911)
Pfam (PF03868)
Pfam (PF01159)
In PDB
Mus musculus (house mouse)TAX-responsive enhancer element-binding protein 107,TAXREB107
8LF60S ribosomal protein L7polymer27031492.91UniProt (P14148)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Mus musculus (house mouse)
9LG60S ribosomal protein L7apolymer26630042.71UniProt (P12970)
Pfam (PF01248)
In PDB
Mus musculus (house mouse)Surfeit locus protein 3
10LH60S ribosomal protein L9polymer19221917.51UniProt (P51410)
Pfam (PF00347)
In PDB
Mus musculus (house mouse)
11LI60S ribosomal protein L10polymer21424657.11UniProt (Q6ZWV3)
Pfam (PF00252)
In PDB
Mus musculus (house mouse)Protein QM homolog,Ribosomal protein L10
12LJ60S ribosomal protein L11polymer17820288.51UniProt (Q9CXW4)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Mus musculus (house mouse)
13LL60S ribosomal protein L13polymer21124364.71UniProt (P47963)
Pfam (PF01294)
In PDB
Mus musculus (house mouse)A52
14LM60S ribosomal protein L14polymer21723620.31UniProt (Q9CR57)
Pfam (PF01929)
In PDB
Mus musculus (house mouse)
15LN60S ribosomal protein L15polymer20424207.31UniProt (Q9CZM2)
Pfam (PF00827)
In PDB
Mus musculus (house mouse)
16LO60S ribosomal protein L13apolymer20323519.41UniProt (P19253)
Pfam (PF00572)
In PDB
Mus musculus (house mouse)Transplantation antigen P198,Tum-P198 antigen
17LP60S ribosomal protein L17polymer18421444.21UniProt (Q6ZWZ7)
Pfam (PF00237)
UniProt (by SIFTS) (Q9CPR4)
In PDB
Mus musculus (house mouse)
18LQ60S ribosomal protein L18polymer18821698.71UniProt (P35980)
Pfam (PF17135)
In PDB
Mus musculus (house mouse)
19LR60S ribosomal protein L19polymer19623535.31UniProt (P84099)
Pfam (PF01280)
In PDB
Mus musculus (house mouse)60S ribosomal protein L19 isoform 1
20LS60S ribosomal protein L18apolymer17620778.51UniProt (P62717)
Pfam (PF01775)
In PDB
Mus musculus (house mouse)
21LT60S ribosomal protein L21polymer16018624.01UniProt (Q9CQM8)
Pfam (PF01157)
UniProt (by SIFTS) (O09167)
In PDB
Mus musculus (house mouse)
22LU60S ribosomal protein L22polymer12814785.01UniProt (P67984)
Pfam (PF01776)
In PDB
Mus musculus (house mouse)60S ribosomal protein L22 isoform a,Heparin-binding protein HBp15
23LV60S ribosomal protein L23polymer14014892.51UniProt (P62830)
Pfam (PF00238)
In PDB
Mus musculus (house mouse)
24LW60S ribosomal protein L24polymer15717825.11UniProt (Q8BP67)
Pfam (PF01246)
In PDB
Mus musculus (house mouse)
25LX60S ribosomal protein L23apolymer15617740.21UniProt (P62751)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Mus musculus (house mouse)
26LY60S ribosomal protein L26polymer14517303.41UniProt (P61255)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Mus musculus (house mouse)Silica-induced gene 20 protein,SIG-20
27LZ60S ribosomal protein L27polymer13615835.81UniProt (P61358)
Pfam (PF00467)
Pfam (PF01777)
In PDB
Mus musculus (house mouse)
28La60S ribosomal protein L27apolymer14816648.61UniProt (P14115)
Pfam (PF00828)
In PDB
Mus musculus (house mouse)L29
29Lb60S ribosomal protein L29polymer16017635.21UniProt (P47915)
Pfam (PF01779)
In PDB
Mus musculus (house mouse)
30Lc60S ribosomal protein L30polymer11512805.11UniProt (P62889)
Pfam (PF01248)
In PDB
Mus musculus (house mouse)
31Ld60S ribosomal protein L31polymer12514494.91UniProt (P62900)
Pfam (PF01198)
In PDB
Mus musculus (house mouse)
32Le60S ribosomal protein L32polymer13515898.91UniProt (P62911)
Pfam (PF01655)
In PDB
Mus musculus (house mouse)
33Lf60S ribosomal protein L35apolymer11012580.81UniProt (O55142)
Pfam (PF01247)
In PDB
Mus musculus (house mouse)
34Lg60S ribosomal protein L34polymer11713325.01UniProt (Q9D1R9)
Pfam (PF01199)
In PDB
Mus musculus (house mouse)
35Lh60S ribosomal protein L35polymer12314595.71UniProt (Q6ZWV7)
Pfam (PF00831)
In PDB
Mus musculus (house mouse)
36Li60S ribosomal protein L36polymer10512290.91UniProt (Q6ZWZ4)
Pfam (PF01158)
UniProt (by SIFTS) (P47964)
In PDB
Mus musculus (house mouse)
37Lj60S ribosomal protein L37polymer9711111.01UniProt (Q9D823)
Pfam (PF01907)
In PDB
Mus musculus (house mouse)
38Lk60S ribosomal protein L38polymer708224.91UniProt (Q9JJI8)
Pfam (PF01781)
In PDB
Mus musculus (house mouse)
39LmUbiquitin-60S ribosomal protein L40polymer12814758.41UniProt (P62984)
Pfam (PF00240)
Pfam (PF01020)
In PDB
Mus musculus (house mouse)Ubiquitin A-52 residue ribosomal protein fusion product 1
40Ln60S ribosomal protein L41polymer253473.51UniProt (P62947)
Pfam (PF05162)
In PDB
Mus musculus (house mouse)
41Lo60S ribosomal protein L36apolymer10612477.01UniProt (P83882)
Pfam (PF00935)
In PDB
Mus musculus (house mouse)60S ribosomal protein L36a-like,60S ribosomal protein L44
42Lp60S ribosomal protein L37apolymer9210299.41UniProt (P61514)
Pfam (PF01780)
In PDB
Mus musculus (house mouse)
43Lr60S ribosomal protein L28polymer13715770.61UniProt (P41105)
Pfam (PF01778)
In PDB
Mus musculus (house mouse)
44L5Mus musculus 28S ribosomal RNApolymer47311530907.41Mus musculus (Mouse)
45L7Mus musculus 5S ribosomal RNApolymer12038691.91GenBank (396138)Mus musculus (house mouse)
46L8Mus musculus 5.8S ribosomal RNApolymer15850795.01GenBank (1059793825)Mus musculus (house mouse)
47S2Mus musculus 18S ribosomal RNApolymer1870603101.91Mus musculus (Mouse)
48SD40S ribosomal protein S3polymer24326715.31UniProt (P62908)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Mus musculus (house mouse)
49SE40S ribosomal protein S4, X isoformpolymer26329654.91UniProt (P62702)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB
Mus musculus (house mouse)
50SF40S ribosomal protein S5polymer20422913.51UniProt (Q91V55)
Pfam (PF00177)
UniProt (by SIFTS) (P97461)
In PDB
Mus musculus (house mouse)Ribosomal protein S5
51SH40S ribosomal protein S7polymer19422168.91UniProt (P62082)
Pfam (PF01251)
In PDB
Mus musculus (house mouse)
52SI40S ribosomal protein S8polymer20824263.41UniProt (P62242)
Pfam (PF01201)
In PDB
Mus musculus (house mouse)
53SK40S ribosomal protein S10polymer16518951.81UniProt (P63325)
Pfam (PF03501)
In PDB
Mus musculus (house mouse)
54SL40S ribosomal protein S11polymer15818468.81UniProt (P62281)
Pfam (PF16205)
Pfam (PF00366)
In PDB
Mus musculus (house mouse)
55SP40S ribosomal protein S15polymer14517076.21UniProt (P62843)
Pfam (PF00203)
In PDB
Mus musculus (house mouse)RIG protein
56SQ40S ribosomal protein S16polymer14616477.41UniProt (P14131)
Pfam (PF00380)
In PDB
Mus musculus (house mouse)
57SR40S ribosomal protein S17polymer13515552.11UniProt (P63276)
Pfam (PF00833)
In PDB
Mus musculus (house mouse)
58SS40S ribosomal protein S18polymer15217759.81UniProt (P62270)
Pfam (PF00416)
In PDB
Mus musculus (house mouse)Ke-3,Ke3
59ST40S ribosomal protein S19polymer14516117.61UniProt (Q9CZX8)
Pfam (PF01090)
In PDB
Mus musculus (house mouse)
60SU40S ribosomal protein S20polymer11913398.81UniProt (P60867)
Pfam (PF00338)
In PDB
Mus musculus (house mouse)
61SV40S ribosomal protein S21polymer839154.41UniProt (Q9CQR2)
Pfam (PF01249)
In PDB
Mus musculus (house mouse)
62SX40S ribosomal protein S23polymer14315844.71UniProt (P62267)
Pfam (PF00164)
In PDB
Mus musculus (house mouse)
63Sa40S ribosomal protein S26polymer11513047.51UniProt (P62855)
Pfam (PF01283)
In PDB
Mus musculus (house mouse)
64Sc40S ribosomal protein S28polymer697855.11UniProt (P62858)
Pfam (PF01200)
In PDB
Mus musculus (house mouse)
65Sd40S ribosomal protein S29polymer566690.81UniProt (P62274)
Pfam (PF00253)
In PDB
Mus musculus (house mouse)
66SgReceptor of activated protein C kinase 1polymer31735115.71UniProt (P68040)
Pfam (PF00400)
In PDB
Mus musculus (house mouse)12-3,Guanine nucleotide-binding protein subunit beta-2-like 1,Receptor for activated C kinase,Receptor of activated protein kinase C 1,p205
67SC40S ribosomal protein S2polymer29331283.41UniProt (P25444)
Pfam (PF00333)
Pfam (PF03719)
In PDB
Mus musculus (house mouse)40S ribosomal protein S4,Protein LLRep3
68SG40S ribosomal protein S6polymer24928751.91UniProt (P62754)
Pfam (PF01092)
In PDB
Mus musculus (house mouse)Phosphoprotein NP33
69SJ40S ribosomal protein S9polymer19422641.61UniProt (Q6ZWN5)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Mus musculus (house mouse)
70SN40S ribosomal protein S13polymer15117259.41UniProt (P62301)
Pfam (PF08069)
Pfam (PF00312)
In PDB
Mus musculus (house mouse)
71SO40S ribosomal protein S14polymer15116302.81UniProt (P62264)
Pfam (PF00411)
In PDB
Mus musculus (house mouse)
72SW40S ribosomal protein S15apolymer13014865.61UniProt (P62245)
Pfam (PF00410)
In PDB
Mus musculus (house mouse)
73SY40S ribosomal protein S24polymer13315463.31UniProt (P62849)
Pfam (PF01282)
In PDB
Mus musculus (house mouse)
74SZ40S ribosomal protein S25polymer12513776.21UniProt (P62852)
Pfam (PF03297)
In PDB
Mus musculus (house mouse)
75Sb40S ribosomal protein S27polymer849480.21UniProt (Q6ZWU9)
Pfam (PF01667)
In PDB
Mus musculus (house mouse)
76Se40S ribosomal protein S30polymer13314441.71UniProt (Q642K5)
Pfam (PF00240)
Pfam (PF04758)
UniProt (by SIFTS) (P62862)
In PDB
Mus musculus (house mouse)
77S6tRNApolymer7524231.51Mus musculus (Mouse)
78LlRibosomal protein L39polymer516426.81UniProt (Q505A8)
Pfam (PF00832)
In PDB
Mus musculus (house mouse)
79LN, L5, S2, LP, LT...MAGNESIUM IONnon-polymer24.3271Chemie (MG)
80Lg, Lj, Lm, Lo, Lp...ZINC IONnon-polymer65.47Chemie (ZN)
81waterwater18.019Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains78
Total formula weight3673039.4
Non-Polymers*Number of molecules278
Total formula weight7044.5
All*Total formula weight3680083.9
*Water molecules are not included.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon