7CO9
Ternary complex of DNA polymerase Mu with 1-nt gapped DNA (T:dGMPNPP) and Mg
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | DNA-directed DNA/RNA polymerase mu | polymer | 482 | 53796.2 | 1 | UniProt (Q9NP87) Pfam (PF14716) Pfam (PF10391) Pfam (PF14792) Pfam (PF14791) In PDB | Homo sapiens (Human) | Pol Mu,Terminal transferase |
| 2 | T | DNA (5'-D(*CP*GP*GP*CP*TP*TP*AP*CP*G)-3') | polymer | 9 | 2731.8 | 1 | synthetic construct | ||
| 3 | D | DNA (5'-D(P*GP*CP*CP*G)-3') | polymer | 4 | 1191.8 | 1 | synthetic construct | ||
| 4 | P | DNA (5'-D(*CP*GP*TP*A)-3') | polymer | 4 | 1190.8 | 1 | synthetic construct | ||
| 5 | A | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine | non-polymer | 506.2 | 1 | Chemie (XG4) | |||
| 6 | A | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 7 | A | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 8 | water | water | 18.0 | 379 | Chemie (HOH) |
Sequence modifications
A: 1 - 494 (UniProt: Q9NP87)
| PDB | External Database | Details |
|---|---|---|
| - | Pro 398 | deletion |
| - | Gly 399 | deletion |
| - | Ala 400 | deletion |
| - | Ala 401 | deletion |
| - | Val 402 | deletion |
| - | Gly 403 | deletion |
| - | Gly 404 | deletion |
| - | Ser 405 | deletion |
| - | Thr 406 | deletion |
| - | Arg 407 | deletion |
| - | Pro 408 | deletion |
| - | Cys 409 | deletion |
| Gly 410 | Pro 410 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 58910.6 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 593.9 | |
| All* | Total formula weight | 59504.5 |
