7CL5
The crystal structure of KanJ in complex with kanamycin B and N-oxalylglycine
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Kanamycin B dioxygenase | polymer | 301 | 33604.1 | 6 | UniProt (Q6L732) Pfam (PF05721) In PDB | Streptomyces kanamyceticus | Kanamycin biosynthesis protein J |
2 | A, B, C, D, E... | NICKEL (II) ION | non-polymer | 58.7 | 6 | Chemie (NI) | |||
3 | A, B, C, D, E... | N-OXALYLGLYCINE | non-polymer | 147.1 | 6 | Chemie (OGA) | |||
4 | A, B, C, D, E... | (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE | non-polymer | 483.5 | 6 | Chemie (9CS) | |||
5 | water | water | 18.0 | 182 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 285 (UniProt: Q6L732)
PDB | External Database | Details |
---|---|---|
Met -15 | - | expression tag |
Asn -14 | - | expression tag |
His -13 | - | expression tag |
Lys -12 | - | expression tag |
Val -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
His -5 | - | expression tag |
Ile -4 | - | expression tag |
Glu -3 | - | expression tag |
Gly -2 | - | expression tag |
Arg -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 201624.7 | |
Non-Polymers* | Number of molecules | 18 |
Total formula weight | 4135.8 | |
All* | Total formula weight | 205760.5 |