7CL3
The crystal structure of KanJ in complex with kanamycin B
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Kanamycin B dioxygenase | polymer | 301 | 33604.1 | 6 | UniProt (Q6L732) | Streptomyces kanamyceticus | Kanamycin biosynthesis protein J |
| 2 | G, J, M, P, S... (A, B, C, D, E...) | NICKEL (II) ION | non-polymer | 58.7 | 6 | Chemie (NI) PubChem (934) | |||
| 3 | H, K, N, Q, T... (A, B, C, D, E...) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 4 | I, L, O, R, U... (A, B, C, D, E...) | (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE | non-polymer | 483.5 | 6 | Chemie (9CS) PubChem (16667723) PubChem (16757757) PubChem (16758194) PubChem (816) PubChem (71201) PubChem (20849273) PubChem (58283955) PubChem (59062015) PubChem (68312129) PubChem (68316021) PubChem (75358283) PubChem (70683016) PubChem (89546223) PubChem (89563805) PubChem (71306482) PubChem (439318) PubChem (91313054) PubChem (118912249) PubChem (133126454) PubChem (11698716) PubChem (117650585) PubChem (117650609) PubChem (118517704) PubChem (118518941) PubChem (121343042) PubChem (9938209) PubChem (12305443) PubChem (12305444) PubChem (162875361) PubChem (134766950) PubChem (135020706) PubChem (162656574) PubChem (162875359) PubChem (162875360) PubChem (163964432) PubChem (173745808) PubChem (173973067) PubChem (175674194) | |||
| 5 | AA, BA, CA, DA, Y... (C, D, E, F, A...) | water | water | 18.0 | 368 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 285 (UniProt: Q6L732)
| PDB | External Database | Details |
|---|---|---|
| Met -15 | - | expression tag |
| Asn -14 | - | expression tag |
| His -13 | - | expression tag |
| Lys -12 | - | expression tag |
| Val -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| Ile -4 | - | expression tag |
| Glu -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Arg -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 201624.7 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 3829.6 | |
| All* | Total formula weight | 205454.3 |
