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7CL3

The crystal structure of KanJ in complex with kanamycin B

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...Kanamycin B dioxygenasepolymer30133604.16UniProt (Q6L732)
Pfam (PF05721)
In PDB
Streptomyces kanamyceticusKanamycin biosynthesis protein J
2A, B, C, D, E...NICKEL (II) IONnon-polymer58.76Chemie (NI)
3A, B, C, D, E...SULFATE IONnon-polymer96.16Chemie (SO4)
4A, B, C, D, E...(1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDEnon-polymer483.56Chemie (9CS)
5waterwater18.0368Chemie (HOH)
Sequence modifications
A, B, C, D, E, F: 1 - 285 (UniProt: Q6L732)
PDBExternal DatabaseDetails
Met -15-expression tag
Asn -14-expression tag
His -13-expression tag
Lys -12-expression tag
Val -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
Ile -4-expression tag
Glu -3-expression tag
Gly -2-expression tag
Arg -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight201624.7
Non-Polymers*Number of molecules18
Total formula weight3829.6
All*Total formula weight205454.3
*Water molecules are not included.

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PDB entries from 2024-06-12

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