7CJ3
Crystal structure of the transmembrane domain of Salpingoeca rosetta rhodopsin phosphodiesterase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Phosphodiesterase | polymer | 291 | 32527.0 | 2 | UniProt (F2TZN0) Pfam (PF01036) | Salpingoeca rosetta (strain ATCC 50818 / BSB-021) | |
| 2 | C, K (A, B) | RETINAL | non-polymer | 284.4 | 2 | Chemie (RET) PubChem (23254473) PubChem (177675058) PubChem (5280490) PubChem (5381765) PubChem (87082476) PubChem (87110449) PubChem (87110609) PubChem (88398773) PubChem (88407543) PubChem (1070) PubChem (638015) PubChem (5353924) PubChem (6436079) PubChem (6436082) PubChem (11426127) PubChem (12227253) PubChem (12227254) PubChem (12227256) PubChem (12227257) PubChem (12227258) PubChem (12227259) PubChem (12227269) PubChem (12227270) PubChem (12227271) PubChem (134688327) PubChem (140510408) PubChem (145826762) PubChem (169423542) PubChem (172878320) | |||
| 3 | D, E, F, G, H... (A, B) | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 14 | Chemie (OLC) PubChem (25021708) PubChem (54294270) PubChem (46840179) PubChem (33022) PubChem (54294271) PubChem (5283468) PubChem (5364833) PubChem (11451146) PubChem (12178130) | |||
| 4 | S, T (A, B) | water | water | 18.0 | 16 | Chemie (HOH) |
Sequence modifications
A, B: 33 - 316 (UniProt: F2TZN0)
| PDB | External Database | Details |
|---|---|---|
| Met 32 | - | initiating methionine |
| Glu 317 | - | expression tag |
| Asn 318 | - | expression tag |
| Leu 319 | - | expression tag |
| Tyr 320 | - | expression tag |
| Phe 321 | - | expression tag |
| Gln 322 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 65054.1 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 5560.4 | |
| All* | Total formula weight | 70614.5 |
