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7C6I

Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in an open-liganded state bound to sophorose

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Sugar ABC transporter, periplasmic sugar-binding proteinpolymer42245906.22UniProt (Q53W80)
Pfam (PF13416)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
2C, D
(C, D)
beta-D-glucopyranose-(1-2)-beta-D-glucopyranosebranched342.32In PDB
GlyTouCan (G26080VZ)
3E
(A)
SULFUR DIOXIDEnon-polymer64.11Chemie (SO2)
4F, G
(A)
CARBON DIOXIDEnon-polymer44.02Chemie (CO2)
5H
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
6I, K, L
(A, B)
SULFATE IONnon-polymer96.13Chemie (SO4)
7J, M
(A, B)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
8N
(B)
1,3-BUTANEDIOLnon-polymer90.11Chemie (BU2)
9O, P
(A, B)
waterwater18.0817Chemie (HOH)
Sequence modifications
A, B: 1 - 415 (UniProt: Q53W80)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Arg 174Lys 192engineered mutation
Thr 175Asn 193engineered mutation
Pro 176Ser 194engineered mutation
-Trp 195deletion
Arg 177Asp 196engineered mutation
Thr 178Val 197engineered mutation
His 416-expression tag
His 417-expression tag
His 418-expression tag
His 419-expression tag
His 420-expression tag
His 421-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight91812.4
BranchedNumber of molecules2
Total formula weight684.6
Non-Polymers*Number of molecules10
Total formula weight713.6
All*Total formula weight93210.6
*Water molecules are not included.

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PDB entries from 2024-10-30

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