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7C6H

Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in an open-liganded state bound to laminaribiose

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Sugar ABC transporter, periplasmic sugar-binding proteinpolymer42245906.22UniProt (Q53W80)
Pfam (PF13416)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
2C, D
(C, D)
beta-D-glucopyranose-(1-3)-beta-D-glucopyranosebranched342.32In PDB
BIRD (PRD_900024)
GlyTouCan (G36535HU)
beta-laminaribiose
3E, K
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
4F
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
5G, L
(A, B)
SULFATE IONnon-polymer96.12Chemie (SO4)
6H, I, J, M, N
(A, B)
1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
7O
(B)
S-1,2-PROPANEDIOLnon-polymer76.11Chemie (PGO)
8P
(B)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
9Q, R
(A, B)
waterwater18.0630Chemie (HOH)
Sequence modifications
A, B: 1 - 415 (UniProt: Q53W80)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Arg 174Lys 192engineered mutation
Thr 175Asn 193engineered mutation
Pro 176Ser 194engineered mutation
-Trp 195deletion
Arg 177Asp 196engineered mutation
Thr 178Val 197engineered mutation
His 416-expression tag
His 417-expression tag
His 418-expression tag
His 419-expression tag
His 420-expression tag
His 421-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight91812.4
BranchedNumber of molecules2
Total formula weight684.6
Non-Polymers*Number of molecules12
Total formula weight814.6
All*Total formula weight93311.6
*Water molecules are not included.

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PDB entries from 2025-10-08

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