7C6H
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in an open-liganded state bound to laminaribiose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Sugar ABC transporter, periplasmic sugar-binding protein | polymer | 422 | 45906.2 | 2 | UniProt (Q53W80) Pfam (PF13416) | Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) | |
| 2 | C, D (C, D) | beta-D-glucopyranose-(1-3)-beta-D-glucopyranose | branched | 342.3 | 2 | In PDB BIRD (PRD_900024) GlyTouCan (G36535HU) | beta-laminaribiose | ||
| 3 | E, K (A, B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 4 | F (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 5 | G, L (A, B) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 6 | H, I, J, M, N (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 7 | O (B) | S-1,2-PROPANEDIOL | non-polymer | 76.1 | 1 | Chemie (PGO) | |||
| 8 | P (B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 9 | Q, R (A, B) | water | water | 18.0 | 630 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 415 (UniProt: Q53W80)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Arg 174 | Lys 192 | engineered mutation |
| Thr 175 | Asn 193 | engineered mutation |
| Pro 176 | Ser 194 | engineered mutation |
| - | Trp 195 | deletion |
| Arg 177 | Asp 196 | engineered mutation |
| Thr 178 | Val 197 | engineered mutation |
| His 416 | - | expression tag |
| His 417 | - | expression tag |
| His 418 | - | expression tag |
| His 419 | - | expression tag |
| His 420 | - | expression tag |
| His 421 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 91812.4 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 684.6 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 814.6 | |
| All* | Total formula weight | 93311.6 |






