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7C0U

Crystal structure of a dinucleotide-binding protein (S127A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Sugar ABC transporter, periplasmic sugar-binding proteinpolymer40644488.82UniProt (Q5SLB4)
Pfam (PF13416)
Thermus thermophilus HB8
2C, D, L
(A, B)
CHLORIDE IONnon-polymer35.53Chemie (CL)
3E, F, G, M
(A, B)
1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
4H, N
(A, B)
GLYCEROLnon-polymer92.12Chemie (GOL)
5I, J, O, P
(A, B)
DI(HYDROXYETHYL)ETHERnon-polymer106.14Chemie (PEG)
6K, Q
(A, B)
[(1S,3R,3aR,6aS)-3-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-5,5-bis(oxidanyl)-1,3,3a,4,6,6a-hexahydrocyclopenta[c]furan-1-yl]methyl [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphatenon-polymer629.52Chemie (FGO)
7R, S
(A, B)
waterwater18.0711Chemie (HOH)
Sequence modifications
A, B: 1 - 398 (UniProt: Q5SLB4)
PDBExternal DatabaseDetails
Met -1-initiating methionine
Met 0-expression tag
Ala 127Ser 146engineered mutation
His 399-expression tag
His 400-expression tag
His 401-expression tag
His 402-expression tag
His 403-expression tag
His 404-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight88977.6
Non-Polymers*Number of molecules15
Total formula weight2222.2
All*Total formula weight91199.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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