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7C0F

Crystal structure of a dinucleotide-binding protein of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BSugar ABC transporter, periplasmic sugar-binding proteinpolymer40644504.82UniProt (Q5SLB4)
Pfam (PF13416)
In PDB
Thermus thermophilus HB8
2A, BCHLORIDE IONnon-polymer35.54Chemie (CL)
3A, BHYPOPHOSPHITEnon-polymer63.02Chemie (PO2)
4B, ACARBON DIOXIDEnon-polymer44.06Chemie (CO2)
5B, A1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
6B, AGLYCEROLnon-polymer92.16Chemie (GOL)
7B, ADI(HYDROXYETHYL)ETHERnon-polymer106.14Chemie (PEG)
8A1,3-PROPANDIOLnon-polymer76.11Chemie (PDO)
9B, ATETRAETHYLENE GLYCOLnon-polymer194.22Chemie (PG4)
10APENTAETHYLENE GLYCOLnon-polymer238.31Chemie (1PE)
11B, A[(1S,3R,3aR,6aS)-3-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-5,5-bis(oxidanyl)-1,3,3a,4,6,6a-hexahydrocyclopenta[c]furan-1-yl]methyl [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphatenon-polymer629.52Chemie (FGO)
12BS-1,2-PROPANEDIOLnon-polymer76.11Chemie (PGO)
13BR-1,2-PROPANEDIOLnon-polymer76.11Chemie (PGR)
14waterwater18.0415Chemie (HOH)
Sequence modifications
A, B: 1 - 398 (UniProt: Q5SLB4)
PDBExternal DatabaseDetails
Met -1-initiating methionine
Met 0-expression tag
His 399-expression tag
His 400-expression tag
His 401-expression tag
His 402-expression tag
His 403-expression tag
His 404-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight89009.6
Non-Polymers*Number of molecules35
Total formula weight3933.2
All*Total formula weight92942.7
*Water molecules are not included.

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PDB entries from 2024-07-24

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