7BNM

Closed conformation of D614G SARS-CoV-2 spike protein

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C	Spike glycoprotein	polymer	1177	129792.4	3	UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB	Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)	S glycoprotein,E2,Peplomer protein
2	D, N, R, T, V...	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	15	In PDB GlyTouCan (G42666HT)
3	A, B, C	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	33	Chemie (NAG)

Sequence modifications

A, B, C: 1 - 1146 (UniProt: P0DTC2)

PDB	External Database	Details
Met -30	-	initiating methionine
Gly -29	-	expression tag
Ile -28	-	expression tag
Leu -27	-	expression tag
Pro -26	-	expression tag
Ser -25	-	expression tag
Pro -24	-	expression tag
Gly -23	-	expression tag
Met -22	-	expression tag
Pro -21	-	expression tag
Ala -20	-	expression tag
Leu -19	-	expression tag
Leu -18	-	expression tag
Ser -17	-	expression tag
Leu -16	-	expression tag
Val -15	-	expression tag
Ser -14	-	expression tag
Leu -13	-	expression tag
Leu -12	-	expression tag
Ser -11	-	expression tag
Val -10	-	expression tag
Leu -9	-	expression tag
Leu -8	-	expression tag
Met -7	-	expression tag
Gly -6	-	expression tag
Cys -5	-	expression tag
Val -4	-	expression tag
Ala -3	-	expression tag
Glu -2	-	expression tag
Thr -1	-	expression tag
Gly 0	-	expression tag
Gly 614	Asp 614	conflict
Ser 682	Arg 682	conflict
Ser 685	Arg 685	conflict
Pro 986	Lys 986	conflict
Pro 987	Val 987	conflict

Contents of the asymmetric unit

Polymers	Number of chains	3
	Total formula weight	389377.2
Branched	Number of molecules	15
	Total formula weight	6366.0
Non-Polymers*	Number of molecules	33
	Total formula weight	7299.9
All*	Total formula weight	403043.1

*Water molecules are not included.