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7B6T

Sheep Polyomavirus VP1 in complex with 10 mM globo-N-tetraose

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AAA, BBB, CCC, DDD, EEE...Capsid protein VP1polymer27630577.410UniProt (A0A0E3ZCF3)
Pfam (PF00718)
In PDB
Sheep polyomavirus 1
2AaA, CaC, FaF, HaH2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranosebranched545.54In PDB
GlyTouCan (G30239EK)
3BaB, DaD, JaJ2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranosebranched383.33In PDB
GlyTouCan (G71661JQ)
4CCC, DDD, EEE, AAA, FFFDI(HYDROXYETHYL)ETHERnon-polymer106.16Chemie (PEG)
5HHH, CCC, DDD, III, EEE...MAGNESIUM IONnon-polymer24.312Chemie (MG)
6BBB, HHH, CCC, DDD, III...POTASSIUM IONnon-polymer39.19Chemie (K)
7HHH, CCC, III, EEE, JJJ...1,2-ETHANEDIOLnon-polymer62.118Chemie (EDO)
8BBBTRIETHYLENE GLYCOLnon-polymer150.23Chemie (PGE)
9III, EEE, GGG(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.23Chemie (MPD)
10waterwater18.03203Chemie (HOH)
Sequence modifications
AAA, BBB, CCC, DDD, EEE, FFF, GGG, HHH, III, JJJ: 20 - 291 (UniProt: A0A0E3ZCF3)
PDBExternal DatabaseDetails
Gly 16-expression tag
Ser 17-expression tag
His 18-expression tag
Met 19-expression tag
Ser 95Cys 96conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight305774.3
BranchedNumber of molecules7
Total formula weight3332.0
Non-Polymers*Number of molecules51
Total formula weight3202.5
All*Total formula weight312308.9
*Water molecules are not included.

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PDB entries from 2024-09-18

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