7B3D
Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with AMP at position -4 (structure 3)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | SARS-CoV-2 RNA-dependent RNA polymerase nsp12 | polymer | 935 | 107053.2 | 1 | UniProt (P0DTD1) Pfam (PF06478) Pfam (PF00680) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | pp1ab,ORF1ab polyprotein |
2 | B | SARS-CoV-2 nsp8 | polymer | 201 | 22175.3 | 1 | UniProt (P0DTD1) Pfam (PF08717) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | pp1ab,ORF1ab polyprotein |
3 | C | SARS-CoV-2 nsp7 | polymer | 86 | 9521.1 | 1 | UniProt (P0DTD1) Pfam (PF08716) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | pp1ab,ORF1ab polyprotein |
4 | P | RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3') | polymer | 15 | 4807.9 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
5 | T | RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3') | polymer | 57 | 18138.7 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
6 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence modifications
A: 1 - 932 (UniProt: P0DTD1)
B: 1 - 198 (UniProt: P0DTD1)
C: 1 - 83 (UniProt: P0DTD1)
PDB | External Database | Details |
---|---|---|
Ser -2 | - | expression tag |
Asn -1 | - | expression tag |
Ala 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser -2 | - | expression tag |
Asn -1 | - | expression tag |
Ala 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser -2 | - | expression tag |
Asn -1 | - | expression tag |
Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 161696.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 130.8 | |
All* | Total formula weight | 161827.0 |