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7B2J

Crystal Structure of SARS-CoV-2 main protease (Nsp5) in complex with compound 5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
3C-like proteinase nsp5polymer30633825.51UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 23CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2B
(A)
2-(1H-1,2,3-benzotriazol-1-yl)-1-(4-methylpiperidin-1-yl)ethan-1-onenon-polymer258.31Chemie (SQ2)
3C
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
4D, E, F, G, H
(A)
DIMETHYL SULFOXIDEnon-polymer78.15Chemie (DMS)
5I
(A)
waterwater18.0357Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight33825.5
Non-Polymers*Number of molecules7
Total formula weight755.1
All*Total formula weight34580.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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