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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7AOI

Trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A1bL28mpolymer21725444.41UniProt (A0A3L6L6A9)
In PDB		Trypanosoma brucei
2A2uL29mpolymer46353072.21UniProt (Q38EM7)
Pfam (PF06984)
In PDB		Trypanosoma brucei
3A3uL30mpolymer15017508.61UniProt (A0A3L6L456)
In PDB		Trypanosoma brucei
4A5bL32mpolymer556931.31UniProt (A0A3L6LD92)
In PDB		Trypanosoma brucei
5A8bL33mpolymer14217173.01UniProt (A0A3L6L070)
In PDB		Trypanosoma brucei
6AAmt-LSU rRNApolymer758242538.51Trypanosoma brucei
7AERibosomal protein L3 mitochondrial, putativepolymer36742538.81UniProt (Q580R4)
Pfam (PF00297)
In PDB		Trypanosoma brucei
8AFRibosomal protein L4/L1 familypolymer44251178.31UniProt (A0A3L6KTM7)
Pfam (PF00573)
In PDB		Trypanosoma brucei
9AIRIBOSOMAL_L9 domain-containing proteinpolymer21225387.21UniProt (A0A3L6L8Y1)
Pfam (PF01281)
In PDB		Trypanosoma brucei
10AKRibosomal protein L11,uL11mpolymer27829590.21UniProt (A0A3L6LEQ0)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Trypanosoma brucei
11AN50S ribosomal protein L13polymer17120327.51UniProt (A0A3L6LAE5)
Pfam (PF00572)
In PDB		Trypanosoma brucei
12APRibosomal_L18e/L15P domain-containing proteinpolymer35441643.41UniProt (A0A3L6L758)
Pfam (PF00828)
In PDB		Trypanosoma brucei
13AR50S ribosomal protein L17polymer25630480.91UniProt (A0A3L6LAG5)
Pfam (PF01196)
In PDB		Trypanosoma brucei
14ATbL19mpolymer13816154.41UniProt (A0A3L6LD66)
In PDB		Trypanosoma brucei
15AUbL20mpolymer19622376.41UniProt (A0A3L6KV21)
In PDB		Trypanosoma brucei
16AVRibosomal protein L21polymer18020182.41UniProt (A0A3L6LA68)
Pfam (PF00829)
In PDB		Trypanosoma brucei
17AWRibosomal protein L22p/L17epolymer27731952.11UniProt (A0A3L6L4Z4)
Pfam (PF00237)
In PDB		Trypanosoma brucei
18AXRibosomal protein L23polymer16519685.51UniProt (A0A3L6KW11)
In PDB		Trypanosoma brucei
19AYuL24mpolymer34039724.71UniProt (C9ZK52)
In PDB		Trypanosoma brucei
20AemL41polymer11613153.11UniProt (A0A3L6KTI0)
In PDB		Trypanosoma brucei
21AfmL42polymer13315185.21UniProt (A0A3L6KXE9)
In PDB		Trypanosoma brucei
22AgMitochondrial ribosomal protein L51 / S25 / CI-B8 domain containing proteinpolymer18522110.81UniProt (A0A3L6LCE5)
Pfam (PF05047)
In PDB		Trypanosoma brucei
23AlmL49polymer18220508.81UniProt (A0A3L6L7H5)
In PDB		Trypanosoma brucei
24AomL52polymer13314975.81UniProt (A0A3L6KS48)
In PDB		Trypanosoma brucei
25ApmL53polymer28833284.61UniProt (A0A3L6L3K9)
In PDB		Trypanosoma brucei
26AtmL63polymer14517103.61UniProt (C9ZU82)
In PDB		Trypanosoma brucei
27AvmL64,mL64polymer19723722.21UniProt (A0A3L6KTC7)
In PDB		Trypanosoma brucei
28BAmL67polymer79889788.01UniProt (D0A5V6)
In PDB		Trypanosoma brucei
29BBmL68,mL68,mL68polymer37140602.11UniProt (A0A3L6KX69)
In PDB		Trypanosoma brucei
30BDmL70polymer41747556.81UniProt (A0A3L6L6S3)
In PDB		Trypanosoma brucei
31BEmL71polymer43849032.21UniProt (C9ZSQ8)
In PDB		Trypanosoma brucei
32BFTetratricopeptide repeatpolymer42148742.31UniProt (A0A3L6LA84)
In PDB		Trypanosoma brucei
33BHmL74polymer22525893.41UniProt (A0A3L6KXN2)
In PDB		Trypanosoma brucei
34BIMitochondrial RNA binding complex 1 subunitpolymer32337503.81UniProt (A0A3L6KZH2)
In PDB		Trypanosoma brucei
35BJmL76polymer16118931.51UniProt (A0A3L6KX00)
In PDB		Trypanosoma brucei
36BKChaperone protein DNAj, putative,mL77,Chaperone protein DNAj, putativepolymer27330694.71UniProt (C9ZQR6)
Pfam (PF00226)
In PDB		Trypanosoma brucei
37BLmL78polymer27631316.11UniProt (A0A3L6L166)
In PDB		Trypanosoma brucei
38BNmL80polymer21425435.61UniProt (C9ZQF0)
In PDB		Trypanosoma brucei
39BOmL81polymer22725450.91UniProt (A0A3L6KS29)
In PDB		Trypanosoma brucei
40BQPeptidyl-prolyl cis-trans isomerasepolymer18520286.81UniProt (Q57WF8)
Pfam (PF00160)
In PDB		Trypanosoma bruceiPPIase
41BRmL84polymer19523420.01UniProt (A0A3L6L538)
In PDB		Trypanosoma brucei
42BSmL85polymer14416955.41UniProt (Q38FG8)
In PDB		Trypanosoma brucei
43BTmL86polymer16719667.11UniProt (A0A3L6L8W0)
In PDB		Trypanosoma brucei
44BUmL87polymer829886.41UniProt (A0A3L6KX50)
In PDB		Trypanosoma brucei
45BWmL89polymer18722082.21UniProt (Q57WW5)
In PDB		Trypanosoma brucei
46BXLIM domain containing protein,mL90polymer11613189.01UniProt (A0A3L6L637)
Pfam (PF00412)
In PDB		Trypanosoma brucei
47BZPeptidyl-prolyl cis-trans isomerasepolymer18920411.11UniProt (A0A3L6KTB1)
Pfam (PF00160)
In PDB		Trypanosoma bruceiPPIase
48BamL93polymer13516882.21UniProt (D0A4T0)
In PDB		Trypanosoma brucei
49BbmL94polymer10311446.01UniProt (A0A3L6L3K4)
In PDB		Trypanosoma brucei
50BcmL95polymer13716813.21UniProt (A0A3L6L276)
In PDB		Trypanosoma brucei
51BfmL98polymer8610096.21UniProt (A0A3L6L4A5)
In PDB		Trypanosoma brucei
52BgmL99polymer829313.51UniProt (A0A3L6LDF0)
In PDB		Trypanosoma brucei
53BhmL100,mL100polymer9210554.31UniProt (A0A3L6L2V1)
In PDB		Trypanosoma brucei
54UAUNK1polymer463287.61Trypanosoma brucei
55UBUNK2polymer9657.71Trypanosoma brucei
56UCUNK3polymer141013.11Trypanosoma brucei
57UDUNK4polymer8586.61Trypanosoma brucei
58UEUNK5polymer12870.91Trypanosoma brucei
59UFUNK6/mt-LAF15_2polymer1399897.81Trypanosoma brucei
60UGUNK7polymer191368.51Trypanosoma brucei
61UHUNK8polymer171226.31Trypanosoma brucei
62UIUNK9polymer392790.11Trypanosoma brucei
63UJUNK10polymer251795.01Trypanosoma brucei
64UKUNK11polymer473358.71Trypanosoma brucei
65XAmt-LAF7,mt-LAF7polymer15518502.11UniProt (Q387S8)
In PDB		Trypanosoma brucei
66XBDEAD-box helicase, putative,mt-LAF2polymer66876345.51UniProt (D0A9G9)
Pfam (PF00270)
Pfam (PF00271)
In PDB		Trypanosoma brucei
67XCmt-LAF4polymer61669432.41UniProt (D0A7A5)
In PDB		Trypanosoma brucei
68XD, XEAcyl carrier proteinpolymer839779.92UniProt (Q57WW9)
Pfam (PF00550)
In PDB		Trypanosoma brucei
69XFmt-LAF15_1polymer19821686.51UniProt (A0A3L6LB16)
In PDB		Trypanosoma brucei
70XG50S ribosomal protein L14polymer17019559.81UniProt (A0A3L6LE16)
Pfam (PF00238)
In PDB		Trypanosoma brucei
71XHmt-LAF8polymer53358945.91Trypanosoma brucei
72XImt-LAF14polymer70378937.21UniProt (Q57U79)
In PDB		Trypanosoma brucei
73XJRNA uridylyltransferasepolymer15017337.91UniProt (A0A3L6L766)
Pfam (PF02410)
In PDB		Trypanosoma brucei
74XLGTP-binding protein, putative,mt-EngApolymer52860253.11UniProt (C9ZS56)
Pfam (PF01926)
Pfam (PF14714)
In PDB		Trypanosoma brucei
75XMComplex1-LYR-likepolymer9110607.31UniProt (A0A3L6L7X4)
In PDB		Trypanosoma brucei
76XNmt-LAF12polymer62070343.11UniProt (Q57YY3)
In PDB		Trypanosoma brucei
77XOSpoU rRNA Methylase familypolymer42848530.01UniProt (A0A3L6L241)
Pfam (PF00588)
In PDB		Trypanosoma brucei
78XPPseudouridylate synthase, putativepolymer37142582.21UniProt (Q38FJ3)
Pfam (PF00849)
In PDB		Trypanosoma brucei
79XQGTP-binding proteinpolymer30533914.91UniProt (A0A3L6L0D5)
Pfam (PF01926)
In PDB		Trypanosoma brucei
80XRLipase (Class 3)polymer16118808.31UniProt (A0A3L6L1Y4)
In PDB		Trypanosoma brucei
81XSmL101polymer18221799.31UniProt (Q4GZ80)
In PDB		Trypanosoma brucei
82XTmt-LAF19polymer9711412.31UniProt (A0A3L6KWY9)
In PDB		Trypanosoma brucei
83A5FE2/S2 (INORGANIC) CLUSTERnon-polymer175.81Chemie (FES)
84AvNICOTINAMIDE-ADENINE-DINUCLEOTIDEnon-polymer663.41Chemie (NAD)
85BX, Bh, XAZINC IONnon-polymer65.44Chemie (ZN)
86XBMAGNESIUM IONnon-polymer24.31Chemie (MG)
87XBADENOSINE-5'-DIPHOSPHATEnon-polymer427.21Chemie (ADP)
88XLGUANOSINE-5'-TRIPHOSPHATEnon-polymer523.22Chemie (GTP)
Sequence modifications
A3: 51 - 200 (UniProt: A0A3L6L456)
PDBExternal DatabaseDetails
Asp 198Ala 198variant
AK: 26 - 235 (UniProt: A0A3L6LEQ0)
AK: 239 - 306 (PDB: 7AOI)
AR: 11 - 266 (UniProt: A0A3L6LAG5)
PDBExternal DatabaseDetails
Trp 24Tyr 24variant
AX: 64 - 228 (UniProt: A0A3L6KW11)
PDBExternal DatabaseDetails
Tyr 126His 126variant
AY: 1 - 340 (UniProt: C9ZK52)
PDBExternal DatabaseDetails
Thr 6Arg 6variant
Av: 27 - 222 (UniProt: A0A3L6KTC7)
PDBExternal DatabaseDetails
Arg 163Ile 163variant
Av: 223 - 223 (PDB: 7AOI)
BB: 62 - 258 (UniProt: A0A3L6KX69)
BB: 264 - 341 (PDB: 7AOI)
BB: 346 - 450 (UniProt: A0A3L6KX69)
BI: 20 - 342 (UniProt: A0A3L6KZH2)
PDBExternal DatabaseDetails
Asn 227Asp 227variant
BJ: 173 - 333 (UniProt: A0A3L6KX00)
PDBExternal DatabaseDetails
Glu 329Ala 329conflict
BK: 84 - 233 (UniProt: C9ZQR6)
BK: 254 - 269 (PDB: 7AOI)
BK: 280 - 386 (UniProt: C9ZQR6)
PDBExternal DatabaseDetails
Thr 348Leu 348variant
BX: 61 - 174 (UniProt: A0A3L6L637)
BX: 175 - 176 (PDB: 7AOI)
Bh: 2 - 92 (UniProt: A0A3L6L2V1)
Bh: 93 - 93 (PDB: 7AOI)
XA: 3 - 156 (UniProt: Q387S8)
XA: 157 - 157 (PDB: 7AOI)
XB: 47 - 711 (UniProt: D0A9G9)
PDBExternal DatabaseDetails
Ala 301Thr 301conflict
Gly 462Glu 463conflict
XB: 712 - 713 (PDB: 7AOI)
XC: 1 - 616 (UniProt: D0A7A5)
PDBExternal DatabaseDetails
Pro 69Ala 79conflict
XL: 45 - 574 (UniProt: C9ZS56)
XL: 575 - 576 (PDB: 7AOI)
XO: 78 - 505 (UniProt: A0A3L6L241)
PDBExternal DatabaseDetails
Asp 337Gly 337conflict
XQ: 44 - 338 (UniProt: A0A3L6L0D5)
PDBExternal DatabaseDetails
Ala 331Phe 331conflict
XS: 22 - 203 (UniProt: Q4GZ80)
PDBExternal DatabaseDetails
Val 163Leu 163conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains83
Total formula weight2331294.9
Non-Polymers*Number of molecules10
Total formula weight2598.7
All*Total formula weight2333893.6
*Water molecules are not included.

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PDB entries from 2024-09-25

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