7AC7

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	1	23S ribosomal RNA	polymer	2903	941526.4	1		Escherichia coli K-12
2	2	16S ribosomal RNA	polymer	1540	499238.0	1		Escherichia coli K-12
3	3	5S ribosomal RNA	polymer	120	38790.1	1		Escherichia coli K-12
4	4	transfer-messenger RNA (tmRNA)	polymer	363	117212.3	1		Escherichia coli
5	5	SsrA-binding protein	polymer	147	16933.5	1	UniProt (P0A832) Pfam (PF01668) In PDB	Escherichia coli K-12	Small protein B
6	7	tRNA-Phe	polymer	76	24750.0	1		Escherichia coli
7	8	mRNA	polymer	15	4889.9	1		Escherichia coli
8	A	50S ribosomal protein L27	polymer	84	9015.3	1	UniProt (P0A7L8) Pfam (PF01016) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL27
9	B	50S ribosomal protein L2	polymer	271	29663.2	1	UniProt (P60422) Pfam (PF00181) Pfam (PF03947) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL2
10	C	50S ribosomal protein L3	polymer	209	22277.5	1	UniProt (P60438) Pfam (PF00297) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL3
11	D	50S ribosomal protein L4	polymer	201	22121.6	1	UniProt (P60723) Pfam (PF00573) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL4
12	E	50S ribosomal protein L5	polymer	177	20073.2	1	UniProt (P62399) Pfam (PF00281) Pfam (PF00673) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL5
13	F	50S ribosomal protein L6	polymer	175	18672.4	1	UniProt (P0AG55) Pfam (PF00347) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL6
14	G	50S ribosomal protein L9	polymer	149	15789.0	1	UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL9
15	H	50S ribosomal protein L10	polymer	130	13981.1	1	UniProt (P0A7J3) Pfam (PF00466) In PDB	Escherichia coli K-12	50S ribosomal protein L8,Large ribosomal subunit protein uL10
16	J	50S ribosomal protein L13	polymer	141	15919.4	1	UniProt (P0AA10) Pfam (PF00572) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL13
17	K	50S ribosomal protein L14	polymer	123	13565.1	1	UniProt (P0ADY3) Pfam (PF00238) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL14
18	L	50S ribosomal protein L15	polymer	144	15008.5	1	UniProt (P02413) Pfam (PF00828) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL15
19	M	50S ribosomal protein L16	polymer	136	15327.3	1	UniProt (P0ADY7) Pfam (PF00252) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL16
20	N	50S ribosomal protein L17	polymer	119	13592.8	1	UniProt (P0AG44) Pfam (PF01196) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL17
21	O	50S ribosomal protein L18	polymer	115	12548.4	1	UniProt (P0C018) Pfam (PF00861) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL18
22	P	50S ribosomal protein L19	polymer	114	13028.1	1	UniProt (P0A7K6) Pfam (PF01245) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL19
23	Q	50S ribosomal protein L20	polymer	117	13396.8	1	UniProt (P0A7L3) Pfam (PF00453) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL20
24	R	50S ribosomal protein L21	polymer	103	11586.4	1	UniProt (P0AG48) Pfam (PF00829) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL21
25	S	50S ribosomal protein L22	polymer	109	12122.2	1	UniProt (P61175) Pfam (PF00237) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL22
26	T	50S ribosomal protein L23	polymer	94	10661.6	1	UniProt (P0ADZ0) Pfam (PF00276) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL23
27	U	50S ribosomal protein L24	polymer	103	11208.1	1	UniProt (P60624) Pfam (PF00467) Pfam (PF17136) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL24
28	V	50S ribosomal protein L25	polymer	94	10713.5	1	UniProt (P68919) Pfam (PF01386) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL25
29	W	Nascent peptide	polymer	2	236.3	1		Escherichia coli K-12
30	X	50S ribosomal protein L28	polymer	77	8896.4	1	UniProt (P0A7M2) Pfam (PF00830) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL28
31	Y	50S ribosomal protein L29	polymer	58	6826.9	1	UniProt (P0A7M6) Pfam (PF00831) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL29
32	Z	50S ribosomal protein L30	polymer	56	6223.4	1	UniProt (P0AG51) Pfam (PF00327) In PDB	Escherichia coli K-12	Large ribosomal subunit protein uL30
33	a	50S ribosomal protein L31	polymer	66	7516.7	1	UniProt (P0A7M9) Pfam (PF01197) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL31-A
34	b	50S ribosomal protein L32	polymer	54	6132.0	1	UniProt (P0A7N4) Pfam (PF01783) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL32
35	c	50S ribosomal protein L33	polymer	52	6057.2	1	UniProt (P0A7N9) Pfam (PF00471) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL33
36	d	50S ribosomal protein L34	polymer	46	5397.5	1	UniProt (P0A7P5) Pfam (PF00468) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL34
37	e	50S ribosomal protein L35	polymer	64	7181.8	1	UniProt (P0A7Q1) Pfam (PF01632) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL35,Ribosomal protein A
38	f	50S ribosomal protein L36	polymer	37	4320.3	1	UniProt (P0A7Q6) Pfam (PF00444) In PDB	Escherichia coli K-12	Large ribosomal subunit protein bL36-A,Ribosomal protein B
39	g	30S ribosomal protein S2	polymer	225	25072.9	1	UniProt (P0A7V0) Pfam (PF00318) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS2
40	h	30S ribosomal protein S3	polymer	208	23249.0	1	UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS3
41	i	30S ribosomal protein S4	polymer	205	23383.0	1	UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS4
42	j	30S ribosomal protein S5	polymer	156	16475.0	1	UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS5
43	k	30S ribosomal protein S6	polymer	104	12126.0	1	UniProt (P02358) Pfam (PF01250) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS6
44	l	30S ribosomal protein S7	polymer	151	16861.5	1	UniProt (P02359) Pfam (PF00177) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS7
45	m	30S ribosomal protein S8	polymer	129	14015.4	1	UniProt (P0A7W7) Pfam (PF00410) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS8
46	n	30S ribosomal protein S9	polymer	126	14397.7	1	UniProt (P0A7X3) Pfam (PF00380) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS9
47	o	30S ribosomal protein S10	polymer	99	11254.0	1	UniProt (P0A7R5) Pfam (PF00338) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS10
48	p	30S ribosomal protein S11	polymer	117	12487.2	1	UniProt (P0A7R9) Pfam (PF00411) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS11
49	q	30S ribosomal protein S12	polymer	123	13683.1	1	UniProt (P0A7S3) Pfam (PF00164) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS12
50	r	30S ribosomal protein S13	polymer	115	12738.9	1	UniProt (P0A7S9) Pfam (PF00416) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS13
51	s	30S ribosomal protein S14	polymer	100	11475.4	1	UniProt (P0AG59) Pfam (PF00253) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS14
52	t	30S ribosomal protein S15	polymer	87	10072.5	1	UniProt (P0ADZ4) Pfam (PF00312) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS15
53	u	30S ribosomal protein S16	polymer	81	9136.5	1	UniProt (P0A7T3) Pfam (PF00886) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS16
54	v	30S ribosomal protein S17	polymer	80	9263.9	1	UniProt (P0AG63) Pfam (PF00366) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS17
55	w	30S ribosomal protein S18	polymer	65	7606.8	1	UniProt (P0A7T7) Pfam (PF01084) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS18
56	x	30S ribosomal protein S19	polymer	82	9349.9	1	UniProt (P0A7U3) Pfam (PF00203) In PDB	Escherichia coli K-12	Small ribosomal subunit protein uS19
57	y	30S ribosomal protein S20	polymer	85	9506.2	1	UniProt (P0A7U7) Pfam (PF01649) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS20
58	z	30S ribosomal protein S21	polymer	70	8392.8	1	UniProt (P68679) Pfam (PF01165) In PDB	Escherichia coli K-12	Small ribosomal subunit protein bS21
59	1, 2, Q, Z, b...	MAGNESIUM ION	non-polymer		24.3	441	Chemie (MG)
60	a, f	ZINC ION	non-polymer		65.4	2	Chemie (ZN)

Contents of the asymmetric unit

Polymers	Number of chains	58
	Total formula weight	2292947.9
Non-Polymers*	Number of molecules	443
	Total formula weight	10849.3
All*	Total formula weight	2303797.2

*Water molecules are not included.