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7A5X

Two copies of the catalytic domain of NanA sialidase from Streptococcus pneumoniae juxtaposed in the P212121 space group, in complex with DANA derivatized with a PEG linker on the glycerol group.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BSialidase Apolymer49856141.62UniProt (P62575)
Pfam (PF13088)
In PDB
Streptococcus pneumoniaeNeuraminidase A
2A, B(4~{S},5~{R},6~{R})-5-acetamido-6-[(1~{R},2~{S})-3-[[1-(2-ethoxyethyl)-1,2,3-triazol-4-yl]methylsulfanyl]-1,2-bis(oxidanyl)propyl]-4-oxidanyl-oxane-2-carboxylic acidnon-polymer462.52Chemie (R7H)
3A, BSULFATE IONnon-polymer96.12Chemie (SO4)
4A, BCHLORIDE IONnon-polymer35.54Chemie (CL)
5A, BCALCIUM IONnon-polymer40.12Chemie (CA)
6waterwater18.0746Chemie (HOH)
Sequence modifications
A, B: 303 - 776 (UniProt: P62575)
PDBExternal DatabaseDetails
Met 279-initiating methionine
Gly 280-expression tag
His 281-expression tag
His 282-expression tag
His 283-expression tag
His 284-expression tag
His 285-expression tag
His 286-expression tag
His 287-expression tag
His 288-expression tag
His 289-expression tag
His 290-expression tag
Ser 291-expression tag
Ser 292-expression tag
Gly 293-expression tag
His 294-expression tag
Ile 295-expression tag
Asp 296-expression tag
Asp 297-expression tag
Asp 298-expression tag
Asp 299-expression tag
Lys 300-expression tag
His 301-expression tag
Met 302-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight112283.2
Non-Polymers*Number of molecules10
Total formula weight1339.1
All*Total formula weight113622.3
*Water molecules are not included.

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PDB entries from 2024-09-25

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