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6ZY8

Cryo-EM structure of the entire Human topoisomerase II alpha in State 2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA topoisomerase 2-alphapolymer1531174654.42UniProt (P11388)
Pfam (PF02518)
Pfam (PF00204)
Pfam (PF01751)
Pfam (PF16898)
Pfam (PF00521)
Pfam (PF08070)
Homo sapiens (Human)DNA topoisomerase II,alpha isozyme
2C, E
(D, F)
DNA (5'-D(*CP*GP*CP*GP*CP*AP*TP*CP*GP*TP*CP*AP*TP*CP*CP*TP*C)-3')polymer175099.32Homo sapiens
3D, F
(E, C)
DNA (5'-D(*GP*AP*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*G)-3')polymer134080.72Homo sapiens
4G, H
(A, B)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.22Chemie (ANP)
5I, J
(D, F)
(5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranosidenon-polymer588.62Chemie (EVP)
PubChem (16394664)
PubChem (16401497)
PubChem (17571827)
PubChem (3310)
PubChem (24214025)
PubChem (44291969)
PubChem (16757762)
PubChem (44343101)
PubChem (44439411)
PubChem (45356822)
PubChem (23947062)
PubChem (40469452)
PubChem (57835439)
PubChem (44399307)
PubChem (439525)
PubChem (58934286)
PubChem (59516320)
PubChem (59890041)
PubChem (59935043)
PubChem (59969579)
PubChem (59981749)
PubChem (59981750)
PubChem (60046278)
PubChem (68028947)
PubChem (70840214)
PubChem (70973405)
PubChem (50989217)
PubChem (50936917)
PubChem (71774979)
PubChem (54395107)
PubChem (56841827)
PubChem (73707413)
PubChem (59360017)
PubChem (59910346)
PubChem (59991120)
PubChem (68297502)
PubChem (143627016)
PubChem (143179527)
PubChem (36462)
PubChem (90657341)
PubChem (90721503)
PubChem (90928389)
PubChem (284997)
PubChem (73896870)
PubChem (487698)
PubChem (89809018)
PubChem (91528489)
PubChem (92209273)
PubChem (71109688)
PubChem (92211248)
PubChem (92481363)
PubChem (5284558)
PubChem (98044669)
PubChem (98456097)
PubChem (99940883)
PubChem (100810256)
PubChem (6419930)
PubChem (92209272)
PubChem (92209274)
PubChem (92209275)
PubChem (92215927)
PubChem (6604389)
PubChem (122535989)
PubChem (6708815)
PubChem (124747955)
PubChem (92481364)
PubChem (9851398)
PubChem (129010358)
PubChem (129427216)
PubChem (129426541)
PubChem (129539581)
PubChem (129427217)
PubChem (129539582)
PubChem (96545492)
PubChem (6604625)
PubChem (6610299)
PubChem (98044670)
PubChem (98047570)
PubChem (98047571)
PubChem (98047572)
PubChem (98456096)
PubChem (98456098)
PubChem (99940884)
PubChem (101060364)
PubChem (101616479)
PubChem (101872048)
PubChem (134694737)
PubChem (117627571)
PubChem (117987058)
PubChem (71163169)
PubChem (11870443)
PubChem (11870444)
PubChem (9851399)
PubChem (9916469)
PubChem (10077076)
PubChem (137370657)
PubChem (13269642)
PubChem (11072012)
PubChem (11758093)
PubChem (142236013)
PubChem (11870245)
PubChem (11870445)
PubChem (124747952)
PubChem (124747953)
PubChem (124747954)
PubChem (124762382)
PubChem (13269634)
PubChem (13269638)
PubChem (146156165)
PubChem (155239770)
PubChem (171042228)
PubChem (172012121)
PubChem (129406641)
PubChem (129416190)
PubChem (129426542)
PubChem (129426543)
PubChem (129539580)
PubChem (129539583)
PubChem (135056244)
PubChem (137704929)
PubChem (144658263)
PubChem (145365700)
PubChem (153427708)
PubChem (154700020)
PubChem (156133909)
PubChem (163016457)
PubChem (163016458)
PubChem (163016459)
PubChem (163016460)
PubChem (163016461)
PubChem (164643737)
PubChem (164935527)
PubChem (167092395)
PubChem (168251311)
PubChem (169440327)
PubChem (172372122)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight367668.8
Non-Polymers*Number of molecules4
Total formula weight2189.5
All*Total formula weight369858.3
*Water molecules are not included.

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PDB entries from 2026-05-13

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