6ZVI
Mbf1-ribosome complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | d | A/P-site tRNA | polymer | 76 | 24501.5 | 1 | Saccharomyces cerevisiae (Baker's yeast) | ||
| 2 | e | P/E-site tRNA | polymer | 77 | 24802.8 | 1 | Saccharomyces cerevisiae (Baker's yeast) | ||
| 3 | f | mRNA | polymer | 35 | 10947.3 | 1 | Saccharomyces cerevisiae (Baker's yeast) | ||
| 4 | h | 18S rRNA | polymer | 1758 | 566313.4 | 1 | Saccharomyces cerevisiae (Baker's yeast) | ||
| 5 | i | 40S ribosomal protein S0-A | polymer | 206 | 22811.1 | 1 | UniProt (P32905) Pfam (PF00318) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Nucleic acid-binding protein NAB1A,Small ribosomal subunit protein uS2-A |
| 6 | j | RPS1A isoform 1 | polymer | 216 | 24498.4 | 1 | UniProt (A0A6A5PRY4) Pfam (PF01015) UniProt (by SIFTS) (P33442) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 7 | k | RPS2 isoform 1 | polymer | 217 | 23213.0 | 1 | UniProt (A0A6A5PWF7) Pfam (PF00333) Pfam (PF03719) UniProt (by SIFTS) (P25443) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 8 | l | RPS3 isoform 1 | polymer | 223 | 24702.8 | 1 | UniProt (A0A6A5Q3Q1) Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (P05750) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 9 | m | 40S ribosomal protein S4-A | polymer | 260 | 29338.1 | 1 | UniProt (P0CX35) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP5,S7,Small ribosomal subunit protein eS4-A,YS6 |
| 10 | n | Rps5p | polymer | 206 | 22908.3 | 1 | UniProt (A0A1L4AA68) Pfam (PF00177) UniProt (by SIFTS) (P26783) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 11 | o | 40S ribosomal protein S6-A | polymer | 218 | 24966.0 | 1 | UniProt (P0CX37) Pfam (PF01092) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP9,S10,Small ribosomal subunit protein eS6-A,YS4 |
| 12 | p | 40S ribosomal protein S7-A | polymer | 185 | 21071.6 | 1 | UniProt (P26786) Pfam (PF01251) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP30,RP40,Small ribosomal subunit protein eS7-A |
| 13 | q | 40S ribosomal protein S8-A | polymer | 199 | 22406.6 | 1 | UniProt (P0CX39) Pfam (PF01201) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP19,S14,Small ribosomal subunit protein eS8-A,YS9 |
| 14 | r | 40S ribosomal protein S9-A | polymer | 185 | 21210.7 | 1 | UniProt (O13516) Pfam (PF00163) Pfam (PF01479) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP21,S13,Small ribosomal subunit protein uS4-A,YP28,YS11 |
| 15 | s | 40S ribosomal protein S10-A | polymer | 92 | 11042.6 | 1 | UniProt (Q08745) Pfam (PF03501) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Small ribosomal subunit protein eS10-A |
| 16 | t | 40S ribosomal protein S11-A | polymer | 146 | 16588.5 | 1 | UniProt (P0CX47) Pfam (PF16205) Pfam (PF00366) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP41,S18,Small ribosomal subunit protein uS17-A,YS12 |
| 17 | u | RPS12 isoform 1 | polymer | 124 | 13327.3 | 1 | UniProt (A0A6A5Q8I3) Pfam (PF01248) UniProt (by SIFTS) (P48589) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 18 | v | 40S ribosomal protein S13 | polymer | 150 | 16928.7 | 1 | UniProt (P05756) Pfam (PF08069) Pfam (PF00312) In PDB | Saccharomyces cerevisiae (Baker's yeast) | S27a,Small ribosomal subunit protein uS15,YS15 |
| 19 | x | RPS15 isoform 1 | polymer | 119 | 13421.7 | 1 | UniProt (A0A6A5Q6F2) Pfam (PF00203) UniProt (by SIFTS) (Q01855) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 20 | y | 40S ribosomal protein S16-A | polymer | 141 | 15659.2 | 1 | UniProt (P0CX51) Pfam (PF00380) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP61R,Small ribosomal subunit protein uS9-A |
| 21 | z | 40S ribosomal protein S17-A | polymer | 125 | 14268.5 | 1 | UniProt (P02407) Pfam (PF00833) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP51A,Small ribosomal subunit protein eS17-A |
| 22 | A | 40S ribosomal protein S18-A | polymer | 145 | 16940.4 | 1 | UniProt (P0CX55) Pfam (PF00416) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Small ribosomal subunit protein uS13-A |
| 23 | B | 40S ribosomal protein S19-A | polymer | 143 | 15810.9 | 1 | UniProt (P07280) Pfam (PF01090) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP55A,S16a,Small ribosomal subunit protein eS19-A,YP45,YS16A |
| 24 | C | RPS20 isoform 1 | polymer | 101 | 11476.5 | 1 | UniProt (A0A6A5PVE9) Pfam (PF00338) UniProt (by SIFTS) (P38701) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 25 | D | 40S ribosomal protein S21-A | polymer | 87 | 9758.8 | 1 | UniProt (P0C0V8) Pfam (PF01249) In PDB | Saccharomyces cerevisiae (Baker's yeast) | S26,Small ribosomal subunit protein eS21-A,YS25 |
| 26 | E | RPS22A isoform 1 | polymer | 129 | 14518.9 | 1 | UniProt (A0A6A5PSE9) Pfam (PF00410) UniProt (by SIFTS) (P0C0W1) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 27 | H | 40S ribosomal protein S23-A | polymer | 144 | 15942.7 | 1 | UniProt (P0CX29) Pfam (PF00164) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP37,S28,Small ribosomal subunit protein uS12-A,YS14 |
| 28 | I | 40S ribosomal protein S24-A | polymer | 134 | 15231.6 | 1 | UniProt (P0CX31) Pfam (PF01282) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP50,Small ribosomal subunit protein eS24-A |
| 29 | J | RPS25A isoform 1 | polymer | 69 | 7930.3 | 1 | UniProt (A0A6A5PZ18) Pfam (PF03297) UniProt (by SIFTS) (Q3E792) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 30 | L | 40S ribosomal protein S27-A | polymer | 81 | 8762.2 | 1 | UniProt (P35997) Pfam (PF01667) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP61,Small ribosomal subunit protein eS27-A,YS20 |
| 31 | N | RPS28A isoform 1 | polymer | 63 | 7116.3 | 1 | UniProt (A0A6A5Q700) Pfam (PF01200) UniProt (by SIFTS) (Q3E7X9) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 32 | P | 40S ribosomal protein S30-A | polymer | 46 | 5267.3 | 1 | UniProt (P0CX33) Pfam (PF04758) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Small ribosomal subunit protein eS30-A |
| 33 | Q | RPS31 isoform 1 | polymer | 73 | 8329.9 | 1 | UniProt (A0A6A5PU37) Pfam (PF01599) UniProt (by SIFTS) (P05759) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 34 | R | Guanine nucleotide-binding protein subunit beta-like protein | polymer | 313 | 34151.4 | 1 | UniProt (P38011) Pfam (PF00400) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Receptor for activated C kinase,Receptor of activated protein kinase C 1,RACK1,Small ribosomal subunit protein RACK1 |
| 35 | T | MBF1 isoform 1 | polymer | 111 | 12423.2 | 1 | UniProt (A0A6A5Q7X0) Pfam (PF08523) Pfam (PF01381) UniProt (by SIFTS) (O14467) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 36 | O | RPS29A isoform 1 | polymer | 53 | 6335.3 | 1 | UniProt (A0A6A5PV92) Pfam (PF00253) UniProt (by SIFTS) (P41057) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 37 | w | 40S ribosomal protein S14-B | polymer | 128 | 13560.5 | 1 | UniProt (P39516) Pfam (PF00411) In PDB | Saccharomyces cerevisiae (Baker's yeast) | RP59B,Small ribosomal subunit protein uS11-B |
| 38 | K | RPS26B isoform 1 | polymer | 97 | 11023.0 | 1 | UniProt (A0A6A5Q0E8) Pfam (PF01283) UniProt (by SIFTS) (P39939) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 39 | L, O | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) |
Sequence modifications
Q: 80 - 152 (UniProt: A0A6A5PU37)
R: 7 - 319 (UniProt: P38011)
| PDB | External Database | Details |
|---|---|---|
| Ala 97 | Lys 97 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 161 | Lys 161 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 38 |
| Total formula weight | 1179507.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 130.8 | |
| All* | Total formula weight | 1179638.3 |
