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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6ZVH

EDF1-ribosome complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1218S rRNApolymer1740561308.41Homo sapiens (Human)
2A40S ribosomal protein SApolymer22124774.41UniProt (P08865)
Pfam (PF00318)
In PDB		Homo sapiens (Human)37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Colon carcinoma laminin-binding protein,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,Multidrug resistance-associated protein MGr1-Ag,NEM/1CHD4,Small ribosomal subunit protein uS2
3B40S ribosomal protein S3apolymer26430002.11UniProt (P61247)
Pfam (PF01015)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS1,v-fos transformation effector protein,Fte-1
4D40S ribosomal protein S3polymer22725172.61UniProt (P23396)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS3
5E40S ribosomal protein S4, X isoformpolymer26229523.71UniProt (P62701)
Pfam (PF00467)
Pfam (PF16121)
Pfam (PF08071)
Pfam (PF00900)
In PDB		Homo sapiens (Human)SCR10,Single copy abundant mRNA protein,Small ribosomal subunit protein eS4
6F40S ribosomal protein S5polymer18921327.71UniProt (P46782)
Pfam (PF00177)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS7
7H40S ribosomal protein S7polymer18921603.21UniProt (P62081)
Pfam (PF01251)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS7
8I40S ribosomal protein S8polymer20624003.01UniProt (P62241)
Pfam (PF01201)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS8
9K40S ribosomal protein S10polymer9811774.01UniProt (P46783)
Pfam (PF03501)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS10
10L40S ribosomal protein S11polymer15317786.01UniProt (P62280)
Pfam (PF16205)
Pfam (PF00366)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS17
11P40S ribosomal protein S15polymer12915156.81UniProt (P62841)
Pfam (PF00203)
In PDB		Homo sapiens (Human)RIG protein,Small ribosomal subunit protein uS19
12Q40S ribosomal protein S16polymer14416249.11UniProt (P62249)
Pfam (PF00380)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS9
13R40S ribosomal protein S17polymer13515578.21UniProt (P08708)
Pfam (PF00833)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS17
14S40S ribosomal protein S18polymer14517029.81UniProt (P62269)
Pfam (PF00416)
In PDB		Homo sapiens (Human)Ke-3,Ke3,Small ribosomal subunit protein uS13
15T40S ribosomal protein S19polymer14315822.21UniProt (P39019)
Pfam (PF01090)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS19
16U40S ribosomal protein S20polymer10411765.91UniProt (P60866)
Pfam (PF00338)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS10
17V40S ribosomal protein S21polymer839124.41UniProt (P63220)
Pfam (PF01249)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS21
18X40S ribosomal protein S23polymer14115626.41UniProt (P62266)
Pfam (PF00164)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS12
19a40S ribosomal protein S26polymer10211742.91UniProt (P62854)
Pfam (PF01283)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS26
20c40S ribosomal protein S28polymer647263.41UniProt (P62857)
Pfam (PF01200)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS28
21d40S ribosomal protein S29polymer556559.61UniProt (P62273)
Pfam (PF00253)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS14
22gReceptor of activated protein C kinase 1polymer31334669.11UniProt (P63244)
Pfam (PF00400)
In PDB		Homo sapiens (Human)Cell proliferation-inducing gene 21 protein,Guanine nucleotide-binding protein subunit beta-2-like 1,Guanine nucleotide-binding protein subunit beta-like protein 12.3,Human lung cancer oncogene 7 protein,HLC-7,Receptor for activated C kinase,Small ribosomal subunit protein RACK1
23C40S ribosomal protein S2polymer22224587.01UniProt (P15880)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Homo sapiens (Human)40S ribosomal protein S4,Protein LLRep3,Small ribosomal subunit protein uS5
24G40S ribosomal protein S6polymer23727471.51UniProt (P62753)
Pfam (PF01092)
In PDB		Homo sapiens (Human)Phosphoprotein NP33,Small ribosomal subunit protein eS6
25J40S ribosomal protein S9polymer18521649.61UniProt (P46781)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS4
26M40S ribosomal protein S12polymer12213661.91UniProt (P25398)
Pfam (PF01248)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS12
27N40S ribosomal protein S13polymer15017128.21UniProt (P62277)
Pfam (PF08069)
Pfam (PF00312)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS15
28O40S ribosomal protein S14polymer14015014.21UniProt (P62263)
Pfam (PF00411)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS11
29W40S ribosomal protein S15apolymer12914734.41UniProt (P62244)
Pfam (PF00410)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein uS8
30Y40S ribosomal protein S24polymer13115203.01UniProt (P62847)
Pfam (PF01282)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS24
31Z40S ribosomal protein S25polymer758526.11UniProt (P62851)
Pfam (PF03297)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS25
32b40S ribosomal protein S27polymer839349.01UniProt (P42677)
Pfam (PF01667)
In PDB		Homo sapiens (Human)Metallopan-stimulin 1,MPS-1,Small ribosomal subunit protein eS27
33e40S ribosomal protein S30polymer424896.91UniProt (P62861)
Pfam (PF04758)
In PDB		Homo sapiens (Human)Small ribosomal subunit protein eS30
34fUbiquitin-40S ribosomal protein S27apolymer677884.31UniProt (P62979)
Pfam (PF01599)
In PDB		Homo sapiens (Human)Ubiquitin carboxyl extension protein 80
35xE-site tRNApolymer7524004.31Homo sapiens (Human)
36yCell growth-regulating nucleolar proteinpolymer728557.21UniProt (Q9NX58)
In PDB		Homo sapiens (Human)
37iEndothelial differentiation-related factor 1polymer11012331.01UniProt (O60869)
Pfam (PF08523)
Pfam (PF01381)
In PDB		Homo sapiens (Human)EDF-1,Multiprotein-bridging factor 1,MBF1
382, G, OMAGNESIUM IONnon-polymer24.330Chemie (MG)
39a, d, fZINC IONnon-polymer65.43Chemie (ZN)
Sequence modifications
M: 11 - 132 (UniProt: P25398)
PDBExternal DatabaseDetails
Gln 52Leu 52conflict
Leu 69Cys 69conflict
Asn 99Lys 99conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains37
Total formula weight1168861.5
Non-Polymers*Number of molecules33
Total formula weight925.4
All*Total formula weight1169786.8
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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