6ZJ6
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with cyclohexylmethyl-Glc-1,3-isofagomine
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (AAA) | Glycosyl hydrolase family 71 | polymer | 385 | 43933.6 | 1 | UniProt (D6D1V7) | Bacteroides xylanisolvens XB1A | |
| 2 | B, C, D, E (AAA) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 3 | F (AAA) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) PubChem (175) | |||
| 4 | G (AAA) | methylcyclohexane | non-polymer | 98.2 | 1 | Chemie (QTE) PubChem (7962) | |||
| 5 | H (AAA) | 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE | non-polymer | 147.2 | 1 | Chemie (IFM) PubChem (25178019) PubChem (44578588) PubChem (447607) PubChem (57181891) PubChem (57590942) PubChem (4452693) PubChem (89062053) PubChem (10240946) PubChem (10510991) PubChem (10820691) PubChem (10844524) PubChem (15235482) PubChem (130784980) PubChem (130905021) PubChem (174012304) | |||
| 6 | I (AAA) | alpha-D-glucopyranose | non-polymer | 180.2 | 1 | Chemie (GLC) | |||
| 7 | J (AAA) | water | water | 18.0 | 463 | Chemie (HOH) |
Sequence modifications
AAA: 17 - 380 (UniProt: D6D1V7)
| PDB | External Database | Details |
|---|---|---|
| Met -4 | - | initiating methionine |
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| His 1 | - | expression tag |
| His 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| Ser 6 | - | expression tag |
| Ser 7 | - | expression tag |
| Gly 8 | - | expression tag |
| Leu 9 | - | expression tag |
| Val 10 | - | expression tag |
| Pro 11 | - | expression tag |
| Arg 12 | - | expression tag |
| Gly 13 | - | expression tag |
| Ser 14 | - | expression tag |
| His 15 | - | expression tag |
| Met 16 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 43933.6 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 732.8 | |
| All* | Total formula weight | 44666.4 |
