6ZGF
Spike Protein of RaTG13 Bat Coronavirus in Closed Conformation
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein | polymer | 1283 | 141875.6 | 3 | UniProt (A0A6B9WHD3) In PDB | Bat coronavirus RaTG13 | |
2 | a, D, d, E, e... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 21 | In PDB GlyTouCan (G42666HT) | |||
3 | b, H, R | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 3 | In PDB GlyTouCan (G21290RB) | |||
4 | c, I, S | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
5 | g, M, W | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 3 | In PDB GlyTouCan (G86851RC) | |||
6 | C, A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 27 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 1252 (UniProt: A0A6B9WHD3)
PDB | External Database | Details |
---|---|---|
Met -30 | - | initiating methionine |
Gly -29 | - | expression tag |
Ile -28 | - | expression tag |
Leu -27 | - | expression tag |
Pro -26 | - | expression tag |
Ser -25 | - | expression tag |
Pro -24 | - | expression tag |
Gly -23 | - | expression tag |
Met -22 | - | expression tag |
Pro -21 | - | expression tag |
Ala -20 | - | expression tag |
Leu -19 | - | expression tag |
Leu -18 | - | expression tag |
Ser -17 | - | expression tag |
Leu -16 | - | expression tag |
Val -15 | - | expression tag |
Ser -14 | - | expression tag |
Leu -13 | - | expression tag |
Leu -12 | - | expression tag |
Ser -11 | - | expression tag |
Val -10 | - | expression tag |
Leu -9 | - | expression tag |
Leu -8 | - | expression tag |
Met -7 | - | expression tag |
Gly -6 | - | expression tag |
Cys -5 | - | expression tag |
Val -4 | - | expression tag |
Ala -3 | - | expression tag |
Glu -2 | - | expression tag |
Thr -1 | - | expression tag |
Gly 0 | - | expression tag |
Thr 604 | Ala 604 | conflict |
Pro 982 | Lys 982 | conflict |
Pro 983 | Val 983 | conflict |
Ser 1205 | Tyr 1205 | conflict |
Gly 1206 | Ile 1206 | conflict |
Arg 1207 | Lys 1207 | conflict |
Glu 1208 | Trp 1208 | conflict |
Asn 1209 | Pro 1209 | conflict |
Leu 1210 | Trp 1210 | conflict |
Phe 1212 | Ile 1212 | conflict |
Gln 1213 | Trp 1213 | conflict |
Gly 1214 | Leu 1214 | conflict |
Gly 1216 | Phe 1216 | conflict |
Gly 1217 | Ile 1217 | conflict |
Ser 1218 | Ala 1218 | conflict |
Tyr 1220 | Leu 1220 | conflict |
Pro 1222 | Ala 1222 | conflict |
Glu 1223 | Ile 1223 | conflict |
Ala 1224 | Ile 1224 | conflict |
Pro 1225 | Met 1225 | conflict |
Arg 1226 | Val 1226 | conflict |
Asp 1227 | Thr 1227 | conflict |
Gly 1228 | Ile 1228 | conflict |
Gln 1229 | Met 1229 | conflict |
Ala 1230 | Leu 1230 | conflict |
Tyr 1231 | Cys 1231 | conflict |
Val 1232 | Cys 1232 | conflict |
Arg 1233 | Met 1233 | conflict |
Lys 1234 | Thr 1234 | conflict |
Asp 1235 | Ser 1235 | conflict |
Gly 1236 | Cys 1236 | conflict |
Glu 1237 | Cys 1237 | conflict |
Trp 1238 | Ser 1238 | conflict |
Val 1239 | Cys 1239 | conflict |
Leu 1241 | Lys 1241 | conflict |
Ser 1242 | Gly 1242 | conflict |
Thr 1243 | Cys 1243 | conflict |
Phe 1244 | Cys 1244 | conflict |
Leu 1245 | Ser 1245 | conflict |
Gly 1246 | Cys 1246 | conflict |
His 1247 | Gly 1247 | conflict |
His 1248 | Ser 1248 | conflict |
His 1249 | Cys 1249 | conflict |
His 1250 | Cys 1250 | conflict |
His 1251 | Lys 1251 | conflict |
His 1252 | Phe 1252 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 425626.7 | |
Branched | Number of molecules | 30 |
Total formula weight | 13485.7 | |
Non-Polymers* | Number of molecules | 27 |
Total formula weight | 5972.6 | |
All* | Total formula weight | 445085.1 |