6ZA3
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Transcriptional regulator, GntR family | polymer | 250 | 27407.2 | 2 | UniProt (A9CJ36) Pfam (PF00392) Pfam (PF07729) In PDB | Agrobacterium fabrum str. C58 | |
2 | E, F | DNA (5'-D(*AP*TP*GP*TP*AP*TP*AP*CP*AP*T)-3') | polymer | 10 | 3043.0 | 2 | Agrobacterium fabrum str. C58 | ||
3 | A, B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
4 | A, F | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
5 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
6 | B | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
7 | B | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
8 | water | water | 18.0 | 146 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 244 (UniProt: A9CJ36)
PDB | External Database | Details |
---|---|---|
His 245 | - | expression tag |
His 246 | - | expression tag |
His 247 | - | expression tag |
His 248 | - | expression tag |
His 249 | - | expression tag |
His 250 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 60900.4 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 579.1 | |
All* | Total formula weight | 61479.6 |