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6ZA3

Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Transcriptional regulator, GntR familypolymer25027407.22UniProt (A9CJ36)
Pfam (PF00392)
Pfam (PF07729)
Agrobacterium fabrum str. C58
2C, D
(E, F)
DNA (5'-D(*AP*TP*GP*TP*AP*TP*AP*CP*AP*T)-3')polymer103043.02Agrobacterium fabrum str. C58
3E, I
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
4F, L
(A, F)
CHLORIDE IONnon-polymer35.52Chemie (CL)
5G, H
(A)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
6J
(B)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
7K
(B)
ACETATE IONnon-polymer59.01Chemie (ACT)
8M, N, O, P
(A, B, E, F)
waterwater18.0146Chemie (HOH)
Sequence modifications
A, B: 1 - 244 (UniProt: A9CJ36)
PDBExternal DatabaseDetails
His 245-expression tag
His 246-expression tag
His 247-expression tag
His 248-expression tag
His 249-expression tag
His 250-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight60900.4
Non-Polymers*Number of molecules8
Total formula weight579.1
All*Total formula weight61479.6
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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