6Z9R
Transcription termination intermediate complex 3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | G | Transcription termination/antitermination protein NusG | polymer | 181 | 20560.5 | 1 | UniProt (C3SID2) Pfam (PF02357) Pfam (PF00467) UniProt (by SIFTS) (P0AFG0) In PDB | Escherichia coli | |
| 2 | f, a, b, c, d... | Transcription termination factor Rho | polymer | 419 | 47070.2 | 6 | UniProt (A0A0A0GPI6) Pfam (PF07498) Pfam (PF07497) Pfam (PF00006) UniProt (by SIFTS) (P0AG30) In PDB | Escherichia coli | ATP-dependent helicase Rho |
| 3 | A | Transcription termination/antitermination protein NusA | polymer | 497 | 55060.8 | 1 | UniProt (C3SSN7) Pfam (PF08529) Pfam (PF00575) Pfam (PF13184) Pfam (PF14520) UniProt (by SIFTS) (P0AFF6) In PDB | Escherichia coli | |
| 4 | U, V | DNA-directed RNA polymerase subunit alpha | polymer | 329 | 36558.7 | 2 | UniProt (P0A7Z4) Pfam (PF01193) Pfam (PF01000) Pfam (PF03118) In PDB | Escherichia coli | RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha |
| 5 | W | DNA-directed RNA polymerase subunit omega | polymer | 91 | 10249.5 | 1 | UniProt (P0A800) Pfam (PF01192) In PDB | Escherichia coli | RNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega |
| 6 | X | DNA-directed RNA polymerase subunit beta | polymer | 1342 | 150820.9 | 1 | UniProt (P0A8V4) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) Pfam (PF10385) Pfam (PF00562) Pfam (PF04560) UniProt (by SIFTS) (P0A8V2) In PDB | Escherichia coli | RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta |
| 7 | Y | DNA-directed RNA polymerase subunit beta' | polymer | 1416 | 156537.0 | 1 | UniProt (C3SIA2) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) UniProt (by SIFTS) (P0A8T7) In PDB | Escherichia coli | RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta' |
| 8 | K | non template strand | polymer | 50 | 15542.0 | 1 | synthetic construct | ||
| 9 | L | template strand | polymer | 50 | 15211.7 | 1 | synthetic construct | ||
| 10 | R | rut RNA | polymer | 99 | 31693.9 | 1 | synthetic construct | ||
| 11 | e, a, b, c, d | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 5 | Chemie (ADP) | |||
| 12 | d, e, Y, a, b... | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
| 13 | d, e, a, b, c | BERYLLIUM TRIFLUORIDE ION | non-polymer | 66.0 | 5 | Chemie (BEF) | |||
| 14 | Y | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 15 | L | 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (DG) | |||
| 16 | water | water | 18.0 | 15 | Chemie (HOH) |
Sequence modifications
A: 1 - 495 (UniProt: C3SSN7)
Y: 1 - 1407 (UniProt: C3SIA2)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ala 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Leu 1408 | - | expression tag |
| Glu 1409 | - | expression tag |
| Val 1410 | - | expression tag |
| His 1411 | - | expression tag |
| His 1412 | - | expression tag |
| His 1413 | - | expression tag |
| His 1414 | - | expression tag |
| His 1415 | - | expression tag |
| His 1416 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 811214.7 | |
| Non-Polymers* | Number of molecules | 19 |
| Total formula weight | 3089.9 | |
| All* | Total formula weight | 814304.6 |
