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6YYH

Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum in ligand-free form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Beta-xylosidasepolymer52461206.52UniProt (B5YB78)
Pfam (PF01229)
Dictyoglomus thermophilum H-6-12
2C
(A)
CITRIC ACIDnon-polymer192.11Chemie (CIT)
3D
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
4E, F
(A, B)
SULFATE IONnon-polymer96.12Chemie (SO4)
5G, H
(A, B)
waterwater18.035Chemie (HOH)
Sequence modifications
A, B: 2 - 502 (UniProt: B5YB78)
PDBExternal DatabaseDetails
Met -21-initiating methionine
Gly -20-expression tag
Ser -19-expression tag
Ser -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
Ser -11-expression tag
Ser -10-expression tag
Gly -9-expression tag
Leu -8-expression tag
Val -7-expression tag
Pro -6-expression tag
Arg -5-expression tag
Gly -4-expression tag
Ser -3-expression tag
His -2-expression tag
Met -1-expression tag
Ala 0-expression tag
Met 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight122412.9
Non-Polymers*Number of molecules4
Total formula weight446.3
All*Total formula weight122859.3
*Water molecules are not included.

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PDB entries from 2025-07-23

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