6YMX
CIII2/CIV respiratory supercomplex from Saccharomyces cerevisiae
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (a) | Cytochrome c oxidase subunit 1 | polymer | 530 | 58316.9 | 1 | UniProt (P00401) Pfam (PF00115) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide I |
| 2 | B (b) | Cytochrome c oxidase subunit 2 | polymer | 236 | 26779.8 | 1 | UniProt (P00410) Pfam (PF02790) Pfam (PF00116) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide II |
| 3 | C (c) | Cytochrome c oxidase subunit 3 | polymer | 268 | 30252.4 | 1 | UniProt (P00420) Pfam (PF00510) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide III |
| 4 | D (d) | Cytochrome c oxidase subunit 4, mitochondrial | polymer | 117 | 12694.4 | 1 | UniProt (P04037) Pfam (PF01215) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide IV |
| 5 | E (e) | Cytochrome c oxidase subunit 5A, mitochondrial | polymer | 128 | 14324.1 | 1 | UniProt (P00424) Pfam (PF02936) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide Va |
| 6 | F (f) | Cytochrome c oxidase subunit 6, mitochondrial | polymer | 99 | 11725.2 | 1 | UniProt (P00427) Pfam (PF02284) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide VI |
| 7 | G (g) | Cytochrome c oxidase subunit 7, mitochondrial | polymer | 55 | 6410.6 | 1 | UniProt (P10174) Pfam (PF02238) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide VII |
| 8 | H (h) | Cytochrome c oxidase subunit 8, mitochondrial | polymer | 51 | 5737.7 | 1 | UniProt (P04039) Pfam (PF02935) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide VIII |
| 9 | I (i) | Cytochrome c oxidase subunit 9, mitochondrial | polymer | 53 | 6241.4 | 1 | UniProt (P07255) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide VIIA |
| 10 | J (j) | Cytochrome c oxidase subunit 12, mitochondrial | polymer | 78 | 9225.3 | 1 | UniProt (Q01519) Pfam (PF02297) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide VIb |
| 11 | K (k) | Cytochrome c oxidase subunit 13, mitochondrial | polymer | 114 | 13306.1 | 1 | UniProt (P32799) Pfam (PF02046) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Cytochrome c oxidase polypeptide VIa |
| 12 | L (m) | Cytochrome c oxidase subunit 26, mitochondrial | polymer | 38 | 4347.0 | 1 | UniProt (Q2V2P9) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 13 | M, V (A, L) | Cytochrome b-c1 complex subunit 1, mitochondrial | polymer | 431 | 47459.3 | 2 | UniProt (P07256) Pfam (PF00675) Pfam (PF05193) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 1,Core protein I,Ubiquinol-cytochrome c oxidoreductase core protein 1,Ubiquinol-cytochrome c reductase 44 kDa protein |
| 14 | N, W (B, M) | Cytochrome b-c1 complex subunit 2, mitochondrial | polymer | 352 | 38751.9 | 2 | UniProt (P07257) Pfam (PF00675) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 2,Core protein II,Ubiquinol-cytochrome c oxidoreductase core protein 2 |
| 15 | O, X (C, N) | Cytochrome b | polymer | 385 | 43686.6 | 2 | UniProt (P00163) Pfam (PF00033) Pfam (PF00032) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 3,Complex III subunit CYTB,Complex III subunit III,Cytochrome b-c1 complex subunit 3,Cytochrome b-c1 complex subunit CYTB,Ubiquinol-cytochrome c oxidoreductase complex cytochrome b subunit |
| 16 | P, Y (D, O) | Cytochrome c1, heme protein, mitochondrial | polymer | 248 | 27807.4 | 2 | UniProt (P07143) Pfam (PF02167) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 4,Complex III subunit IV,Cytochrome b-c1 complex subunit 4,Ubiquinol-cytochrome c oxidoreductase cytochrome c1 subunit,Cytochrome c-1 |
| 17 | Q, Z (E, P) | Cytochrome b-c1 complex subunit Rieske, mitochondrial | polymer | 185 | 20123.0 | 2 | UniProt (P08067) Pfam (PF02921) Pfam (PF00355) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 5,Rieske iron-sulfur protein,RISP,Ubiquinol-cytochrome c oxidoreductase iron-sulfur subunit |
| 18 | R (F) | Cytochrome b-c1 complex subunit 6, mitochondrial | polymer | 74 | 8854.8 | 1 | UniProt (P00127) Pfam (PF02320) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 6,Complex III subunit VI,Cytochrome c1 non-heme 17 kDa protein,Mitochondrial hinge protein,Ubiquinol-cytochrome c oxidoreductase subunit 6,Ubiquinol-cytochrome c reductase 17 kDa protein |
| 19 | BA, S (G, R) | Cytochrome b-c1 complex subunit 7, mitochondrial | polymer | 126 | 14452.6 | 2 | UniProt (P00128) Pfam (PF02271) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 7,Complex III subunit VII,Ubiquinol-cytochrome c oxidoreductase subunit 7,Ubiquinol-cytochrome c reductase 14 kDa protein |
| 20 | CA, T (H, S) | Cytochrome b-c1 complex subunit 8, mitochondrial | polymer | 93 | 10856.3 | 2 | UniProt (P08525) Pfam (PF02939) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 8,Complex III subunit VII,Ubiquinol-cytochrome c oxidoreductase subunit 8,Ubiquinol-cytochrome c reductase complex 11 kDa protein,Ubiquinone-binding protein QP-C |
| 21 | U (I) | Cytochrome b-c1 complex subunit 9, mitochondrial | polymer | 54 | 6214.2 | 1 | UniProt (P22289) Pfam (PF05365) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 9,Complex III subunit X,Cytochrome c1 non-heme 7.3 kDa protein,Ubiquinol-cytochrome c oxidoreductase subunit 9,Ubiquinol-cytochrome c reductase 7.3 kDa protein |
| 22 | AA (Q) | Cytochrome b-c1 complex subunit 6, mitochondrial | polymer | 75 | 8983.9 | 1 | UniProt (P00127) Pfam (PF02320) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 6,Complex III subunit VI,Cytochrome c1 non-heme 17 kDa protein,Mitochondrial hinge protein,Ubiquinol-cytochrome c oxidoreductase subunit 6,Ubiquinol-cytochrome c reductase 17 kDa protein |
| 23 | DA (T) | Cytochrome b-c1 complex subunit 9, mitochondrial | polymer | 54 | 6230.2 | 1 | UniProt (P22289) Pfam (PF05365) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 9,Complex III subunit X,Cytochrome c1 non-heme 7.3 kDa protein,Ubiquinol-cytochrome c oxidoreductase subunit 9,Ubiquinol-cytochrome c reductase 7.3 kDa protein |
| 24 | EA (U) | Cytochrome b-c1 complex subunit 10, mitochondrial | polymer | 44 | 4920.7 | 1 | UniProt (P37299) Pfam (PF09796) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 10,Complex III subunit XI,Ubiquinol-cytochrome c oxidoreductase subunit 10,Ubiquinol-cytochrome c reductase 8.5 kDa protein |
| 25 | FA (V) | Cytochrome b-c1 complex subunit 10, mitochondrial | polymer | 51 | 5750.8 | 1 | UniProt (P37299) Pfam (PF09796) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Complex III subunit 10,Complex III subunit XI,Ubiquinol-cytochrome c oxidoreductase subunit 10,Ubiquinol-cytochrome c reductase 8.5 kDa protein |
| 26 | GA (a) | COPPER (II) ION | non-polymer | 63.5 | 1 | Chemie (CU) | |||
| 27 | HA, IA (a) | HEME-A | non-polymer | 852.8 | 2 | Chemie (HEA) | |||
| 28 | DB, JA, MA, NA, RA... (D, a, b, c, i...) | PHOSPHATIDYLETHANOLAMINE | non-polymer | 734.0 | 7 | Chemie (PTY) | |||
| 29 | KA, MB (a, N) | (2R,5S,11R,14R)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate | non-polymer | 834.9 | 2 | Chemie (CN3) | |||
| 30 | LA (b) | DINUCLEAR COPPER ION | non-polymer | 127.1 | 1 | Chemie (CUA) | |||
| 31 | GB, OA, QA, RB, UA (I, c, e, T, m) | 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE | non-polymer | 734.0 | 5 | Chemie (PCF) | |||
| 32 | PA (d) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 33 | NB, VA (O, C) | (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate | non-polymer | 592.8 | 2 | Chemie (6PH) | |||
| 34 | CB, HB, IB, OB, WA... (D, N, O, C) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 6 | Chemie (HEM) | |||
| 35 | KB, YA (N, C) | (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate | non-polymer | 692.0 | 2 | Chemie (8PE) | |||
| 36 | ZA (C) | (5S,11R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate | non-polymer | 634.6 | 1 | Chemie (CN5) | |||
| 37 | AB, JB (C, N) | 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL | non-polymer | 592.9 | 2 | Chemie (UQ6) | |||
| 38 | BB, LB (C, N) | (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate | non-polymer | 593.8 | 2 | Chemie (9PE) | |||
| 39 | EB, PB (E, O) | (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate | non-polymer | 564.7 | 2 | Chemie (7PH) | |||
| 40 | FB, QB (E, P) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 2 | Chemie (FES) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 32 |
| Total formula weight | 646589.5 | |
| Non-Polymers* | Number of molecules | 38 |
| Total formula weight | 23197.4 | |
| All* | Total formula weight | 669786.9 |
