6YKK
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 15
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Leucine--tRNA ligase | polymer | 877 | 98185.3 | 1 | UniProt (A0A5K1KQ39) Pfam (PF09334) Pfam (PF13603) Pfam (PF00133) Pfam (PF08264) UniProt (by SIFTS) (Q5FAJ3) | Neisseria gonorrhoeae | Leucyl-tRNA synthetase,LeuRS |
| 2 | B (A) | [(2~{R},3~{S},4~{R},5~{S})-3,4-bis(oxidanyl)-5-[2-(5-phenyl-1,2,3,4-tetrazol-2-yl)ethyl]oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-4-methyl-pentanoyl]sulfamate | non-polymer | 498.6 | 1 | Chemie (OVK) | |||
| 3 | C, D, E (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 4 | F (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 5 | G (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 6 | H (A) | water | water | 18.0 | 338 | Chemie (HOH) |
Sequence modifications
A: 1 - 876 (UniProt: A0A5K1KQ39)
| PDB | External Database | Details |
|---|---|---|
| Gly 0 | - | expression tag |
| Asn 454 | Asp 456 | engineered mutation |
| Ile 508 | Met 510 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 98185.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 774.5 | |
| All* | Total formula weight | 98959.8 |
