6YJQ

Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B (AAA, BBB)	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A,Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A	polymer	515	58996.9	2	UniProt (Q09328) Pfam (PF15024)	Homo sapiens (Human)	Alpha-mannoside beta-1,6-N-acetylglucosaminyltransferase V,GlcNAc-T V,GNT-V,Mannoside acetylglucosaminyltransferase 5,N-acetylglucosaminyl-transferase V,Alpha-mannoside beta-1,6-N-acetylglucosaminyltransferase V,GlcNAc-T V,GNT-V,Mannoside acetylglucosaminyltransferase 5,N-acetylglucosaminyl-transferase V
2	C, D, E, J, K... (AAA, BBB)	1,2-ETHANEDIOL	non-polymer		62.1	8	Chemie (EDO)
3	F, G, H, I, P... (AAA, BBB)	SULFATE ION	non-polymer		96.1	10	Chemie (SO4)
4	N (BBB)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	1	Chemie (NAG)
5	V, W (AAA, BBB)	water	water		18.0	287	Chemie (HOH)

Sequence modifications

AAA, BBB: 214 - 328 (UniProt: Q09328)
AAA, BBB: 333 - 728 (UniProt: Q09328)

PDB	External Database	Details
Gly 329	-	linker
Gly 330	-	linker
Gly 331	-	linker
Gly 332	-	linker

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	117993.8
Non-Polymers*	Number of molecules	19
	Total formula weight	1678.4
All*	Total formula weight	119672.2

*Water molecules are not included.