6YHS
Acinetobacter baumannii ribosome-amikacin complex - 50S subunit
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | 23S ribosomal RNA | polymer | 2903 | 940330.1 | 1 | GenBank (1188467441) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 2 | B (5) | 5S ribosomal RNA | polymer | 117 | 37608.3 | 1 | GenBank (1560725104) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 3 | C, D (6, 8) | E-site tRNA | polymer | 77 | 24346.5 | 2 | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | ||
| 4 | E (A) | 50S ribosomal protein L2 | polymer | 274 | 30319.1 | 1 | UniProt (D0CD00) Pfam (PF00181) Pfam (PF03947) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 5 | F (B) | 50S ribosomal protein L3 | polymer | 212 | 22512.6 | 1 | UniProt (D0CCZ7) Pfam (PF00297) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 6 | G (C) | 50S ribosomal protein L4 | polymer | 200 | 21583.9 | 1 | UniProt (D0CCZ8) Pfam (PF00573) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 7 | H (D) | 50S ribosomal protein L5 | polymer | 178 | 20051.5 | 1 | UniProt (D0CD09) Pfam (PF00281) Pfam (PF00673) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 8 | I (E) | 50S ribosomal protein L6 | polymer | 177 | 19126.0 | 1 | UniProt (D0CD12) Pfam (PF00347) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 9 | J (F) | 50S ribosomal protein L13 | polymer | 142 | 15951.4 | 1 | UniProt (D0CG35) Pfam (PF00572) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 10 | K (G) | 50S ribosomal protein L14 | polymer | 122 | 13523.9 | 1 | UniProt (D0CD07) Pfam (PF00238) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 11 | L (H) | 50S ribosomal protein L15 | polymer | 146 | 15509.9 | 1 | UniProt (D0CD16) Pfam (PF00828) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 12 | M (I) | 50S ribosomal protein L16 | polymer | 137 | 15498.3 | 1 | UniProt (D0CD04) Pfam (PF00252) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 13 | N (J) | 50S ribosomal protein L17 | polymer | 125 | 14021.2 | 1 | UniProt (D0CD23) Pfam (PF01196) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 14 | O (K) | 50S ribosomal protein L18 | polymer | 116 | 12443.3 | 1 | UniProt (D0CD13) Pfam (PF00861) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 15 | P (L) | 50S ribosomal protein L19 | polymer | 122 | 13619.9 | 1 | UniProt (D0CCR8) Pfam (PF01245) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 16 | Q (M) | 50S ribosomal protein L20 | polymer | 119 | 13468.9 | 1 | UniProt (D0CA76) Pfam (PF00453) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 17 | R (N) | 50S ribosomal protein L21 | polymer | 103 | 11496.4 | 1 | UniProt (D0CDQ6) Pfam (PF00829) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 18 | S (O) | 50S ribosomal protein L22 | polymer | 110 | 11960.1 | 1 | UniProt (D0CD02) Pfam (PF00237) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 19 | T (P) | 50S ribosomal protein L23 | polymer | 106 | 11607.4 | 1 | UniProt (D0CCZ9) Pfam (PF00276) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 20 | U (Q) | 50S ribosomal protein L24 | polymer | 105 | 11187.9 | 1 | UniProt (D0CD08) Pfam (PF00467) Pfam (PF17136) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 21 | V (R) | 50S ribosomal protein L25 | polymer | 98 | 10914.5 | 1 | UniProt (D0C9L7) Pfam (PF01386) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 22 | W (S) | 50S ribosomal protein L27 | polymer | 85 | 9072.4 | 1 | UniProt (D0CDQ7) Pfam (PF01016) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 23 | X (T) | 50S ribosomal protein L28 | polymer | 78 | 9125.8 | 1 | UniProt (D0CAL0) Pfam (PF00830) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 24 | Y (U) | 50S ribosomal protein L29 | polymer | 65 | 7449.7 | 1 | UniProt (D0CD05) Pfam (PF00831) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 25 | Z (V) | 50S ribosomal protein L30 | polymer | 58 | 6654.8 | 1 | UniProt (D0CD15) Pfam (PF00327) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 26 | AA (X) | 50S ribosomal protein L32 | polymer | 61 | 7096.9 | 1 | UniProt (D0C9K5) Pfam (PF01783) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 27 | BA (Y) | 50S ribosomal protein L33 | polymer | 51 | 6105.3 | 1 | UniProt (D0CAL1) Pfam (PF00471) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 28 | CA (Z) | 50S ribosomal protein L34 | polymer | 44 | 5192.2 | 1 | UniProt (D0CG06) Pfam (PF00468) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 29 | DA (a) | 50S ribosomal protein L35 | polymer | 64 | 7424.1 | 1 | UniProt (D0CA77) Pfam (PF01632) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 30 | EA (b) | 50S ribosomal protein L36 | polymer | 38 | 4276.2 | 1 | UniProt (D0CD18) Pfam (PF00444) | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | |
| 31 | AB, AC, AD, AE, AF... (1, 5) | MAGNESIUM ION | non-polymer | 24.3 | 160 | Chemie (MG) | |||
| 32 | JG (b) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 31 |
| Total formula weight | 1373825.2 | |
| Non-Polymers* | Number of molecules | 161 |
| Total formula weight | 3954.2 | |
| All* | Total formula weight | 1377779.4 |
