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6YHN

Crystal structure of domains 4-5 of CNFy from Yersinia pseudotuberculosis

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cytotoxic necrotizing factorpolymer51957848.91UniProt (A0A0N9JNY6)
Pfam (PF15962)
Pfam (PF05785)
Yersinia pseudotuberculosis
2B
(A)
(R,R)-2,3-BUTANEDIOLnon-polymer90.11Chemie (BU3)
3C, D, E, F
(A)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
4G, H
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
5I
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
6J
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
7K
(A)
waterwater18.0367Chemie (HOH)
Sequence modifications
A: 526 - 1014 (UniProt: A0A0N9JNY6)
PDBExternal DatabaseDetails
Gly 522-expression tag
Gly 523-expression tag
Gly 524-expression tag
Arg 525-expression tag
Ser 1015-expression tag
Ala 1016-expression tag
Gly 1017-expression tag
Gly 1018-expression tag
Asp 1019-expression tag
Tyr 1020-expression tag
Lys 1021-expression tag
Asp 1022-expression tag
His 1023-expression tag
Asp 1024-expression tag
Gly 1025-expression tag
Asp 1026-expression tag
Tyr 1027-expression tag
Lys 1028-expression tag
Asp 1029-expression tag
His 1030-expression tag
Asp 1031-expression tag
Ile 1032-expression tag
Asp 1033-expression tag
Tyr 1034-expression tag
Lys 1035-expression tag
Asp 1036-expression tag
Asp 1037-expression tag
Asp 1038-expression tag
Asp 1039-expression tag
Lys 1040-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight57848.9
Non-Polymers*Number of molecules9
Total formula weight364.8
All*Total formula weight58213.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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