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6YEO

Crystal structure of AmpC from E. coli with cyclic boronate 2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Beta-lactamasepolymer35839587.94UniProt (P00811)
Pfam (PF00144)
Escherichia coli (strain K12)Cephalosporinase
2E, J, N, R
(A, B, C, D)
(4~{R})-4-[[4-(aminomethyl)phenyl]carbonylamino]-3,3-bis(oxidanyl)-2-oxa-3-boranuidabicyclo[4.4.0]deca-1(10),6,8-triene-10-carboxylic acidnon-polymer357.14Chemie (OK3)
3F, K, S
(A, B, D)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.23Chemie (MPD)
4G, T
(A, D)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.32Chemie (EPE)
5H
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
6I, M, U
(A, B, D)
CHLORIDE IONnon-polymer35.53Chemie (CL)
7L, O, P, Q
(B, C)
GLYCEROLnon-polymer92.14Chemie (GOL)
8V, W, X, Y
(A, B, C, D)
waterwater18.0850Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight158351.7
Non-Polymers*Number of molecules17
Total formula weight2757.4
All*Total formula weight161109.1
*Water molecules are not included.

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PDB entries from 2026-02-25

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