6YAM
Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | initiator methionylated tRNA | polymer | 75 | 24376.6 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 2 | B (l) | 60s ribosomal protein l41 | polymer | 25 | 3473.5 | 1 | UniProt (A0A087WNH4) Pfam (PF05162) | Oryctolagus cuniculus (Rabbit) | eL41 |
| 3 | C (C) | 40S ribosomal protein uS2 | polymer | 208 | 23360.8 | 1 | UniProt (G1TLT8) Pfam (PF00318) | Oryctolagus cuniculus (Rabbit) | 37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40 |
| 4 | D (D) | 40S ribosomal protein eS1 | polymer | 264 | 29929.0 | 1 | UniProt (G1TN72) Pfam (PF01015) | Oryctolagus cuniculus (Rabbit) | |
| 5 | E (E) | 40S ribosomal protein uS5 | polymer | 226 | 24814.3 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 6 | F (F) | 40S ribosomal protein uS3 | polymer | 227 | 25158.5 | 1 | UniProt (G1TNM3) Pfam (PF07650) Pfam (PF00189) | Oryctolagus cuniculus (Rabbit) | |
| 7 | G (G) | 40S ribosomal protein eS4 | polymer | 263 | 29658.9 | 1 | UniProt (G1TK17) Pfam (PF00467) Pfam (PF16121) Pfam (PF08071) Pfam (PF00900) | Oryctolagus cuniculus (Rabbit) | |
| 8 | H (H) | 40S ribosomal protein uS7 | polymer | 191 | 21525.9 | 1 | UniProt (U3KMN4) Pfam (PF00177) | Oryctolagus cuniculus (Rabbit) | |
| 9 | I (I) | 40S ribosomal protein eS6 | polymer | 237 | 27471.5 | 1 | UniProt (G1TM55) Pfam (PF01092) | Oryctolagus cuniculus (Rabbit) | |
| 10 | J (J) | ribosomal protein eS7 | polymer | 190 | 21716.4 | 1 | UniProt (G1SVB0) | Oryctolagus cuniculus (Rabbit) | |
| 11 | K (K) | 40S ribosomal protein eS8 | polymer | 206 | 23902.9 | 1 | UniProt (G1TJW1) Pfam (PF01201) | Oryctolagus cuniculus (Rabbit) | |
| 12 | L (L) | 40S ribosomal protein uS4 | polymer | 182 | 21266.2 | 1 | UniProt (B7NZS8) Pfam (PF00163) Pfam (PF01479) | Oryctolagus cuniculus (Rabbit) | |
| 13 | M (M) | 40S ribosomal protein eS10 | polymer | 98 | 11774.0 | 1 | UniProt (G1T168) Pfam (PF03501) | Oryctolagus cuniculus (Rabbit) | |
| 14 | N (N) | 40S ribosomal protein uS17 | polymer | 158 | 18468.8 | 1 | UniProt (G1TRM4) Pfam (PF16205) Pfam (PF00366) | Oryctolagus cuniculus (Rabbit) | |
| 15 | O (O) | 40S ribosomal protein eS12 | polymer | 132 | 14539.0 | 1 | UniProt (G1SFR8) Pfam (PF01248) | Oryctolagus cuniculus (Rabbit) | |
| 16 | P (P) | ribosomal protein uS15 | polymer | 150 | 17128.2 | 1 | UniProt (G1SP51) Pfam (PF08069) Pfam (PF00312) | Oryctolagus cuniculus (Rabbit) | |
| 17 | Q (Q) | 40S ribosomal protein uS11 | polymer | 151 | 16302.8 | 1 | UniProt (G1T1F0) Pfam (PF00411) | Oryctolagus cuniculus (Rabbit) | |
| 18 | R (S) | 40S ribosomal protein uS9 | polymer | 141 | 15975.8 | 1 | UniProt (G1SGX4) Pfam (PF00380) | Oryctolagus cuniculus (Rabbit) | |
| 19 | S (T) | 40S ribosomal protein eS17 | polymer | 135 | 15552.1 | 1 | UniProt (G1TU13) Pfam (PF00833) | Oryctolagus cuniculus (Rabbit) | |
| 20 | T (V) | 40S ribosomal protein eS19 | polymer | 145 | 16235.8 | 1 | UniProt (G1TN62) Pfam (PF01090) | Oryctolagus cuniculus (Rabbit) | |
| 21 | U (W) | 40S ribosomal protein uS10 | polymer | 119 | 13398.8 | 1 | UniProt (G1SIZ2) Pfam (PF00338) | Oryctolagus cuniculus (Rabbit) | |
| 22 | V (X) | 40S ribosomal protein eS21 | polymer | 82 | 8896.1 | 1 | UniProt (G1TM82) Pfam (PF01249) | Oryctolagus cuniculus (Rabbit) | |
| 23 | W (Y) | 40S ribosomal protein uS8 | polymer | 130 | 14865.6 | 1 | UniProt (G1TG89) Pfam (PF00410) | Oryctolagus cuniculus (Rabbit) | |
| 24 | X (Z) | 40S ribosomal protein uS12 | polymer | 142 | 15757.6 | 1 | UniProt (G1SZ47) Pfam (PF00164) | Oryctolagus cuniculus (Rabbit) | |
| 25 | Y (a) | 40S ribosomal protein eS24 | polymer | 133 | 15434.3 | 1 | UniProt (G1TS40) Pfam (PF01282) UniProt (by SIFTS) (A0A5F9D2E6) | Oryctolagus cuniculus (Rabbit) | |
| 26 | Z (b) | 40S ribosomal protein eS26 | polymer | 115 | 12961.5 | 1 | UniProt (G1TFE8) Pfam (PF01283) | Oryctolagus cuniculus (Rabbit) | |
| 27 | AA (c) | 40S ribosomal protein eS27 | polymer | 84 | 9480.2 | 1 | UniProt (G1TZ76) Pfam (PF01667) | Oryctolagus cuniculus (Rabbit) | |
| 28 | BA (d) | 40S ribosomal protein eS28 | polymer | 69 | 7855.1 | 1 | UniProt (G1TIB4) Pfam (PF01200) | Oryctolagus cuniculus (Rabbit) | |
| 29 | CA (e) | ribosomal protein uS14 | polymer | 53 | 6364.4 | 1 | UniProt (G1U7M4) Pfam (PF00253) | Oryctolagus cuniculus (Rabbit) | |
| 30 | DA (f) | ribosomal protein eS31 | polymer | 71 | 8358.9 | 1 | UniProt (G1SK22) Pfam (PF00240) Pfam (PF01599) | Oryctolagus cuniculus (Rabbit) | |
| 31 | EA (g) | ribosomal protein RACK1 | polymer | 313 | 34669.1 | 1 | UniProt (G1SJB4) Pfam (PF00400) | Oryctolagus cuniculus (Rabbit) | |
| 32 | FA (n) | ribosomal protein eS25 | polymer | 75 | 8526.1 | 1 | UniProt (G1TDB3) Pfam (PF03297) | Oryctolagus cuniculus (Rabbit) | |
| 33 | GA (i) | 40S ribosomal protein eS30 | polymer | 59 | 6741.0 | 1 | UniProt (G1T8A2) Pfam (PF04758) | Oryctolagus cuniculus (Rabbit) | |
| 34 | HA (2) | 18S ribosomal RNA | polymer | 1863 | 601015.7 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 35 | IA (A) | eukaryotic translation initiation factor 2 subunit alpha | polymer | 266 | 30633.3 | 1 | UniProt (G1T2G4) Pfam (PF00575) Pfam (PF07541) | Oryctolagus cuniculus (Rabbit) | |
| 36 | JA (B) | eukaryotic translation initiation factor 2 subunit gamma | polymer | 422 | 45862.4 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 37 | KA (j) | eukaryotic translation initiation factor 1A | polymer | 144 | 16488.4 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 38 | LA (k) | ATP-binding cassette sub-family E member 1 (ABCE1) | polymer | 595 | 66986.8 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 39 | MA (U) | 40S ribosomal protein uS13 | polymer | 152 | 17759.8 | 1 | UniProt (G1TPG3) Pfam (PF00416) | Oryctolagus cuniculus (Rabbit) | |
| 40 | NA (R) | 40S ribosomal protein uS19 | polymer | 145 | 17049.2 | 1 | UniProt (G1U0Q2) Pfam (PF00203) | Oryctolagus cuniculus (Rabbit) | |
| 41 | OA (3) | beta-globin mRNA | polymer | 45 | 14454.7 | 1 | Homo sapiens | ||
| 42 | PA (m) | eukaryotic translation initiation factor 3 subunit d | polymer | 548 | 64042.7 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 43 | QA (y) | Eukaryotic translation initiation factor 3 subunit A | polymer | 1350 | 163226.9 | 1 | UniProt (A0A5F9C991) Pfam (PF22591) Pfam (PF01399) | Oryctolagus cuniculus (Rabbit) | eIF3a,Eukaryotic translation initiation factor 3 subunit 10,eIF-3-theta |
| 44 | RA (v) | Eukaryotic translation initiation factor 3 subunit C | polymer | 913 | 105676.2 | 1 | UniProt (G1U971) Pfam (PF05470) Pfam (PF01399) | Oryctolagus cuniculus (Rabbit) | eIF3c,Eukaryotic translation initiation factor 3 subunit 8,eIF3 p110 |
| 45 | SA (w) | Eukaryotic translation initiation factor 3 subunit E | polymer | 445 | 52281.6 | 1 | UniProt (G1SUC8) Pfam (PF09440) Pfam (PF01399) Pfam (PF21357) | Oryctolagus cuniculus (Rabbit) | eIF3e,Eukaryotic translation initiation factor 3 subunit 6,eIF-3 p48 |
| 46 | TA (q) | Eukaryotic translation initiation factor 3 subunit F | polymer | 272 | 30111.3 | 1 | UniProt (G1SLC2) Pfam (PF01398) Pfam (PF13012) | Oryctolagus cuniculus (Rabbit) | eIF3f,Eukaryotic translation initiation factor 3 subunit 5,eIF-3-epsilon,eIF3 p47 |
| 47 | UA (r) | eukaryotic translation initiation factor 3 subunit h | polymer | 352 | 39954.3 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 48 | VA (s) | Eukaryotic translation initiation factor 3 subunit K | polymer | 218 | 25129.7 | 1 | UniProt (G1T3L2) Pfam (PF10075) | Oryctolagus cuniculus (Rabbit) | eIF3k,Eukaryotic translation initiation factor 3 subunit 12,eIF-3 p25 |
| 49 | WA (t) | eukaryotic translation initiation factor 3 subunit l | polymer | 564 | 66776.7 | 1 | Oryctolagus cuniculus (Rabbit) | ||
| 50 | XA (u) | Eukaryotic translation initiation factor 3 subunit M | polymer | 374 | 42555.8 | 1 | UniProt (G1SLW8) Pfam (PF01399) Pfam (PF18005) | Oryctolagus cuniculus (Rabbit) | eIF3m |
| 51 | YA, ZA (k) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 2 | Chemie (SF4) | |||
| 52 | AB (k) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 53 | BB, CB (k) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | non-polymer | 522.2 | 2 | Chemie (GNP) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 50 |
| Total formula weight | 1965945.0 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1772.0 | |
| All* | Total formula weight | 1967717.0 |
