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6YA8

Cdc7-Dbf4 bound to ADP-BeF3

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cell division cycle 7-related protein kinase,Cell division cycle 7-related protein kinase,Cell division cycle 7-related protein kinasepolymer35940230.41UniProt (O00311)
Pfam (PF00069)
Homo sapiens (Human)huCdc7,huCdc7,huCdc7
2B
(B)
Protein DBF4 homolog Apolymer14417003.41UniProt (Q9UBU7)
Pfam (PF07535)
Homo sapiens (Human)Activator of S phase kinase,Chiffon homolog A,DBF4-type zinc finger-containing protein 1
3C
(A)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.21Chemie (ADP)
4D, F
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5E
(A)
BERYLLIUM TRIFLUORIDE IONnon-polymer66.01Chemie (BEF)
6G, H
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
7I, J
(A, B)
waterwater18.0302Chemie (HOH)
Sequence modifications
A: 37 - 345 (UniProt: O00311)
PDBExternal DatabaseDetails
Met 36-initiating methionine
A: 346 - 467 (UniProt: O00311)
A: 534 - 574 (UniProt: O00311)
PDBExternal DatabaseDetails
Ala 468-linker
Gly 469-linker
Ala 532-linker
Gly 533-linker
B: 210 - 350 (UniProt: Q9UBU7)
PDBExternal DatabaseDetails
Gly 207-expression tag
Pro 208-expression tag
Gly 209-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight57233.8
Non-Polymers*Number of molecules6
Total formula weight672.6
All*Total formula weight57906.5
*Water molecules are not included.

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PDB entries from 2025-12-17

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