6YA4
Crystal structure of PnrA from S. pneumoniae in complex with cytidine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (C, A, B, D) | Lipoprotein | polymer | 332 | 35184.7 | 4 | UniProt (A0A0H2UPF3) Pfam (PF02608) | Streptococcus pneumoniae | |
| 2 | E, I, M, P (C, A, B, D) | 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE | non-polymer | 243.2 | 4 | Chemie (CTN) | |||
| 3 | F, G, J, K, N... (C, A, B, D) | NICKEL (II) ION | non-polymer | 58.7 | 7 | Chemie (NI) | |||
| 4 | H (C) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 5 | L, O (A, B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
| 6 | S, T, U, V (C, A, B, D) | water | water | 18.0 | 499 | Chemie (HOH) |
Sequence modifications
C, A, B, D: 23 - 333 (UniProt: A0A0H2UPF3)
| PDB | External Database | Details |
|---|---|---|
| Gly 2 | - | expression tag |
| Ser 3 | - | expression tag |
| Ser 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
| His 9 | - | expression tag |
| His 10 | - | expression tag |
| Met 11 | - | expression tag |
| Ser 12 | - | expression tag |
| Gly 13 | - | expression tag |
| Glu 14 | - | expression tag |
| Asn 15 | - | expression tag |
| Leu 16 | - | expression tag |
| Tyr 17 | - | expression tag |
| Phe 18 | - | expression tag |
| Gln 19 | - | expression tag |
| Gly 20 | - | expression tag |
| Ala 21 | - | expression tag |
| Ser 22 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 140738.8 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 1655.0 | |
| All* | Total formula weight | 142393.8 |






