6Y0Q
Alpha-ketoglutarate-dependent dioxygenase AlkB in complex with Fe, AKG and methylated DNA under anaerobic environment using FT-SSX methods
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Alpha-ketoglutarate-dependent dioxygenase AlkB | polymer | 216 | 24103.5 | 1 | UniProt (P05050) | Escherichia coli K-12 | Alkylated DNA repair protein AlkB,DNA oxidative demethylase AlkB |
| 2 | B (A) | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 1 | Chemie (AKG) | |||
| 3 | C (A) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 4 | D (A) | [(3~{S},5~{R})-5-(6-azanyl-1-methyl-purin-9-yl)-2-(phosphonooxymethyl)oxolan-3-yl] [(2~{R},3~{S},5~{R})-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl hydrogen phosphate | non-polymer | 648.4 | 1 | Chemie (O5W) | |||
| 5 | E (A) | water | water | 18.0 | 136 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 24103.5 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 850.4 | |
| All* | Total formula weight | 24953.9 |
