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6XYT

Crystal structure of the O-state of the light-driven sodium pump KR2 in the pentameric form, pH 8.0

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E
(A, B, C, D, E)
Sodium pumping rhodopsinpolymer27331075.15UniProt (N0DKS8)
Pfam (PF01036)
Dokdonia eikasta
2AA, AC, BA, BC, CA...
(B, E, C, A, D)
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoatenon-polymer356.533Chemie (OLC)
3EA, FA, GA, HA, HC...
(B, E, A, D, C)
EICOSANEnon-polymer282.524Chemie (LFA)
4FB, IA, LC, PA, PC...
(C, B, E, A, D)
SODIUM IONnon-polymer23.010Chemie (NA)
5AB, JA, MC, S, VB
(C, B, E, A, D)
octyl beta-D-glucopyranosidenon-polymer292.45Chemie (BOG)
6BB, DB, GB, IB, LA...
(C, D, B, E, A)
OLEIC ACIDnon-polymer282.514Chemie (OLA)
7CB, HB, KA
(C, D, B)
GLYCEROLnon-polymer92.13Chemie (GOL)
8QC, RC, SC, TC, UC
(A, B, C, D, E)
waterwater18.0296Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight155375.3
Non-Polymers*Number of molecules89
Total formula weight24469.4
All*Total formula weight179844.8
*Water molecules are not included.

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PDB entries from 2024-11-13

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