6XSA
Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Vacuolar protein sorting-associated protein 29 | polymer | 192 | 21636.9 | 1 | UniProt (Q9UBQ0) Pfam (PF12850) | Homo sapiens (Human) | hVPS29,PEP11 homolog,Vesicle protein sorting 29 |
| 2 | B (B) | 48V-TYR-LEU-PRO-THR-ILE-THR-GLY-VAL-GLY-HIS-LEU-TRP-HIS-PRO-LEU | polymer | 16 | 1866.2 | 1 | synthetic construct | ||
| 3 | C (B) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 4 | D, E (A, B) | water | water | 18.0 | 189 | Chemie (HOH) |
Sequence modifications
A: 1 - 182 (UniProt: Q9UBQ0)
| PDB | External Database | Details |
|---|---|---|
| Gly -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Pro -7 | - | expression tag |
| Glu -6 | - | expression tag |
| Phe -5 | - | expression tag |
| Gly -4 | - | expression tag |
| Thr -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Asp -1 | - | expression tag |
| Arg 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 23503.1 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 96.1 | |
| All* | Total formula weight | 23599.1 |
