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6X6C

Cryo-EM structure of NLRP1-DPP9-VbP complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, D)
Dipeptidyl peptidase 9polymer891101762.02UniProt (Q86TI2)
Pfam (PF19520)
Pfam (PF00930)
Pfam (PF00326)
Homo sapiens (Human)DP9,Dipeptidyl peptidase IV-related protein 2,DPRP-2,Dipeptidyl peptidase IX,DPP IX,Dipeptidyl peptidase-like protein 9,DPLP9
2C, D
(E, F)
NACHT, LRR and PYD domains-containing protein 1polymer1473166069.52UniProt (Q9C000)
Pfam (PF13516)
Pfam (PF13553)
Pfam (PF00619)
Pfam (PF02758)
Pfam (PF05729)
Pfam (PF17779)
Pfam (PF17776)
Pfam (PF00560)
Homo sapiens (Human)Caspase recruitment domain-containing protein 7,Death effector filament-forming ced-4-like apoptosis protein,Nucleotide-binding domain and caspase recruitment domain
3E, F
(A, D)
[(2~{R})-1-[(2~{R})-2-azanyl-3-methyl-butanoyl]pyrrolidin-2-yl]boronic acidnon-polymer214.12Chemie (GK2)
Sequence modifications
A, D: 1 - 863 (UniProt: Q86TI2)
PDBExternal DatabaseDetails
Met -27-expression tag
Ser -26-expression tag
Tyr -25-expression tag
Tyr -24-expression tag
His -23-expression tag
His -22-expression tag
His -21-expression tag
His -20-expression tag
His -19-expression tag
His -18-expression tag
Asp -17-expression tag
Tyr -16-expression tag
Asp -15-expression tag
Ile -14-expression tag
Pro -13-expression tag
Thr -12-expression tag
Thr -11-expression tag
Glu -10-expression tag
Asn -9-expression tag
Leu -8-expression tag
Tyr -7-expression tag
Phe -6-expression tag
Gln -5-expression tag
Gly -4-expression tag
Ala -3-expression tag
Met -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight535662.9
Non-Polymers*Number of molecules2
Total formula weight428.1
All*Total formula weight536091.1
*Water molecules are not included.

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PDB entries from 2024-11-20

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