6WRE
Crystal structure of mouse DXO in complex with 5'-OH RNA substrate mimic and calcium ion
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Decapping and exoribonuclease protein | polymer | 378 | 43132.5 | 1 | UniProt (O70348) Pfam (PF08652) | Mus musculus (Mouse) | DXO,Dom-3 homolog Z |
| 2 | B (D) | RNA (5'-R(*UP*(U37)P*(U37)P*UP)-3') | polymer | 6 | 1824.2 | 1 | Homo sapiens | ||
| 3 | C (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 4 | D (A) | 3'-URIDINEMONOPHOSPHATE | non-polymer | 324.2 | 1 | Chemie (U3P) | |||
| 5 | E, F (A, D) | water | water | 18.0 | 128 | Chemie (HOH) |
Sequence modifications
A: 27 - 384 (UniProt: O70348)
| PDB | External Database | Details |
|---|---|---|
| Met 7 | - | initiating methionine |
| Gly 8 | - | expression tag |
| Ser 9 | - | expression tag |
| Ser 10 | - | expression tag |
| His 11 | - | expression tag |
| His 12 | - | expression tag |
| His 13 | - | expression tag |
| His 14 | - | expression tag |
| His 15 | - | expression tag |
| His 16 | - | expression tag |
| Ser 17 | - | expression tag |
| Ser 18 | - | expression tag |
| Gly 19 | - | expression tag |
| Leu 20 | - | expression tag |
| Val 21 | - | expression tag |
| Pro 22 | - | expression tag |
| Arg 23 | - | expression tag |
| Gly 24 | - | expression tag |
| Ser 25 | - | expression tag |
| His 26 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 44956.7 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 364.3 | |
| All* | Total formula weight | 45321.0 |
