6WJ1
Crystal structure of Fab 54-4H03 bound to H1 influenza hemagglutinin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, C, E) | Hemagglutinin HA1 chain | polymer | 330 | 36658.3 | 3 | UniProt (A0A3S7XTA4) Pfam (PF00509) UniProt (by SIFTS) (C3W5S1) | Influenza A virus | |
| 2 | D, E, F (B, D, F) | Hemagglutinin HA2 chain | polymer | 175 | 19992.1 | 3 | UniProt (A0A3S5H8L7) Pfam (PF00509) UniProt (by SIFTS) (C3W5S1) | Influenza A virus | |
| 3 | G, I, K (H, J, G) | Fab 54-4H03 heavy chain | polymer | 230 | 24881.9 | 3 | Homo sapiens (Human) | ||
| 4 | H, J, L (L, K, I) | Fab 54-4H03 light chain | polymer | 216 | 23598.1 | 3 | Homo sapiens (Human) | ||
| 5 | M, O, T (M, O, T) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
| 6 | N (N) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
| 7 | P (P) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G22573RC) | |||
| 8 | Q (Q) | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) | |||
| 9 | R (R) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 10 | S (S) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 11 | AA, BA, CA, DA, U... (E, B, D, A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 10 | Chemie (NAG) |
Sequence modifications
A, C, E: 11 - 329 (UniProt: A0A3S7XTA4)
B, D, F: 1 - 175 (UniProt: A0A3S5H8L7)
| PDB | External Database | Details |
|---|---|---|
| Asp 8 | - | expression tag |
| Pro 9 | - | expression tag |
| Gly 10 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 47 | Glu 391 | conflict |
| Ile 77 | Val 421 | conflict |
| Ser 175 | Gly 519 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 315391.2 | |
| Branched | Number of molecules | 8 |
| Total formula weight | 4635.3 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 2212.1 | |
| All* | Total formula weight | 322238.6 |
