6WHM
The crystal structure of the 2009/H1N1/California PA endonuclease wild type bound to DNA oligomer TAGC (cleaved TTAGCATT, 5mM overnight DNA soak)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | PA-X protein,Polymerase acidic protein | polymer | 197 | 23148.3 | 1 | UniProt (A0A481PFF5) UniProt (C6H0Y9) Pfam (PF00603) | Influenza A virus | |
| 2 | B (B) | DNA (5'-D(P*TP*AP*GP*C)-3') | polymer | 8 | 2416.6 | 1 | synthetic construct | ||
| 3 | C, D (A) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 4 | E, I (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 5 | F (A) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 6 | G, H (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 7 | J, K (A, B) | water | water | 18.0 | 136 | Chemie (HOH) |
Sequence modifications
A: 1 - 50 (UniProt: A0A481PFF5)
A: 74 - 196 (UniProt: C6H0Y9)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | expression tag |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Gly 51 | - | linker |
| Gly 52 | - | linker |
| Ser 53 | - | linker |
| Lys 73 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 25565.0 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 479.9 | |
| All* | Total formula weight | 26044.8 |






