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6VW1

Structure of SARS-CoV-2 chimeric receptor-binding domain complexed with its receptor human ACE2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Angiotensin-converting enzyme 2polymer59769153.72UniProt (Q9BYF1)
Pfam (PF01401)
Homo sapiens (Human)ACE-related carboxypeptidase,Angiotensin-converting enzyme homolog,ACEH,Metalloprotease MPROT15
2C, D
(E, F)
SARS-CoV-2 chimeric RBDpolymer21724329.52UniProt (P59594)
UniProt (P0DTC2)
Pfam (PF09408)
Human SARS coronavirus (SARS-CoV)S glycoprotein,E2,Peplomer protein
3E, F, L
(C, D, L)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.53In PDB
GlyTouCan (G15407YE)
4G, H, I, K, M
(G, H, I, K, M)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.45In PDB
GlyTouCan (G42666HT)
5J
(J)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched789.71In PDB
GlyTouCan (G25906YW)
6N, R
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
7O, S
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
8P, T, U, V
(A, B)
1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
9Q, W, X
(A, B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
10AA, BA, Y, Z
(E, F, A, B)
waterwater18.026Chemie (HOH)
Sequence modifications
E, F: 319 - 454 (UniProt: P59594)
E, F: 455 - 518 (UniProt: P0DTC2)
E, F: 519 - 535 (UniProt: P59594)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight186966.3
BranchedNumber of molecules9
Total formula weight4671.4
Non-Polymers*Number of molecules11
Total formula weight1113.6
All*Total formula weight192751.2
*Water molecules are not included.

238895

PDB entries from 2025-07-16

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