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6VW1

Structure of SARS-CoV-2 chimeric receptor-binding domain complexed with its receptor human ACE2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BAngiotensin-converting enzyme 2polymer59769153.72UniProt (Q9BYF1)
Pfam (PF01401)
In PDB
Homo sapiens (Human)ACE-related carboxypeptidase,Angiotensin-converting enzyme homolog,ACEH,Metalloprotease MPROT15
2E, FSARS-CoV-2 chimeric RBDpolymer21724329.52UniProt (P59594)
UniProt (P0DTC2)
Pfam (PF09408)
In PDB
Human SARS coronavirus (SARS-CoV)S glycoprotein,E2,Peplomer protein
3C, D, Lbeta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.53In PDB
GlyTouCan (G15407YE)
4G, H, I, K, M2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.45In PDB
GlyTouCan (G42666HT)
5J2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched789.71In PDB
GlyTouCan (G25906YW)
6A, BZINC IONnon-polymer65.42Chemie (ZN)
7A, BCHLORIDE IONnon-polymer35.52Chemie (CL)
8A, B1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
9A, B2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
10waterwater18.026Chemie (HOH)
Sequence modifications
E, F: 319 - 454 (UniProt: P59594)
E, F: 455 - 518 (UniProt: P0DTC2)
E, F: 519 - 535 (UniProt: P59594)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight186966.3
BranchedNumber of molecules9
Total formula weight4671.4
Non-Polymers*Number of molecules11
Total formula weight1113.6
All*Total formula weight192751.2
*Water molecules are not included.

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PDB entries from 2024-06-26

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