6VMZ
Crystal Structure of a H5N1 influenza virus hemagglutinin with CBS1117
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Hemagglutinin | polymer | 334 | 37948.0 | 3 | UniProt (Q1KHJ8) Pfam (PF00509) In PDB | Influenza A virus (A/chicken/Vietnam/4/2003(H5N1)) | |
2 | B, D, F | Hemagglutinin | polymer | 181 | 20881.1 | 3 | UniProt (Q1KHK7) Pfam (PF00509) In PDB | Influenza A virus (A/chicken/Vietnam/30/2003(H5N1)) | |
3 | A, C, E | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 8 | Chemie (NAG) | |||
4 | A, C, E | 2,6-dichloro-N-[1-(propan-2-yl)piperidin-4-yl]benzamide | non-polymer | 315.2 | 3 | Chemie (R3P) | |||
5 | water | water | 18.0 | 435 | Chemie (HOH) |
Sequence modifications
A, C, E: 11 - 331 (UniProt: Q1KHJ8)
B, D, F: 1 - 175 (UniProt: Q1KHK7)
PDB | External Database | Details |
---|---|---|
Ala 7 | - | expression tag |
Asp 8 | - | expression tag |
Pro 9 | - | expression tag |
Gly 10 | - | expression tag |
Gln 332 | - | expression tag |
Arg 333 | - | expression tag |
Glu 334 | - | expression tag |
Arg 335 | - | expression tag |
Arg 336 | - | expression tag |
Arg 337 | - | expression tag |
Lys 338 | - | expression tag |
Lys 339 | - | expression tag |
Arg 340 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 176 | - | expression tag |
Arg 177 | - | expression tag |
Leu 178 | - | expression tag |
Val 179 | - | expression tag |
Pro 180 | - | expression tag |
Arg 181 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 176487.4 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 2715.4 | |
All* | Total formula weight | 179202.8 |