6VG1
xenopus protocadherin 8.1 EC1-6
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | protocadherin protein | polymer | 647 | 70834.9 | 2 | UniProt (Q6GLU2) Pfam (PF08266) Pfam (PF00028) In PDB | Xenopus laevis (African clawed frog) | |
2 | C, D | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 2 | In PDB GlyTouCan (G32152BH) | |||
3 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
4 | B, A | CALCIUM ION | non-polymer | 40.1 | 30 | Chemie (CA) | |||
5 | B, A | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
6 | B, A | alpha-D-mannopyranose | non-polymer | 180.2 | 4 | Chemie (MAN) | |||
7 | B, A | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
8 | water | water | 18.0 | 138 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 641 (UniProt: Q6GLU2)
PDB | External Database | Details |
---|---|---|
His 642 | - | expression tag |
His 643 | - | expression tag |
His 644 | - | expression tag |
His 645 | - | expression tag |
His 646 | - | expression tag |
His 647 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 141669.7 | |
Branched | Number of molecules | 2 |
Total formula weight | 1465.4 | |
Non-Polymers* | Number of molecules | 40 |
Total formula weight | 2164.0 | |
All* | Total formula weight | 145299.1 |