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6VC4

Peanut lectin complexed with S-beta-D-Thiogalactopyranosyl beta-D-glucopyranoside derivative (STGD)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Galactose-binding lectinpolymer23625209.04UniProt (P02872)
Pfam (PF00139)
Arachis hypogaea (Peanut)Agglutinin,PNA
2E, H, K, N
(A, B, C, D)
(2R,3R,4S,5R,6S)-2-(hydroxymethyl)-6-{[(2S,3R,4S,5S,6S)-3,4,5-trihydroxy-6-({[(1-{[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-methoxytetrahydro-2H-pyran-2-yl]methyl}-1H-1,2,3-triazol-4-yl)methyl]sulfanyl}methyl)tetrahydro-2H-pyran-2-yl]sulfanyl}tetrahydro-2H-pyran-3,4,5-triol (non-preferred name)non-polymer631.74Chemie (QWG)
3F, I, L, O
(A, B, C, D)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
4G, J, M, P
(A, B, C, D)
CALCIUM IONnon-polymer40.14Chemie (CA)
5Q, R, S, T
(A, B, C, D)
waterwater18.0777Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight100835.8
Non-Polymers*Number of molecules12
Total formula weight2906.7
All*Total formula weight103742.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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