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6V6N

The crystal structure of a class D beta-lactamase from Agrobacterium tumefaciens

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Beta-lactamasepolymer25127798.14UniProt (A0A1V2APZ1)
Pfam (PF00905)
Rhizobium radiobacter (Agrobacterium tumefaciens)
2E, G, H, J
(A, B, C, D)
GLYCEROLnon-polymer92.14Chemie (GOL)
3F
(A)
FORMIC ACIDnon-polymer46.01Chemie (FMT)
4I
(C)
SULFATE IONnon-polymer96.11Chemie (SO4)
5K, L, M, N
(A, B, C, D)
waterwater18.0391Chemie (HOH)
Sequence modifications
A, B, C, D: 26 - 273 (UniProt: A0A1V2APZ1)
PDBExternal DatabaseDetails
Ser 23-expression tag
Asn 24-expression tag
Ala 25-expression tag
Tyr 195Asp 195engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight111192.4
Non-Polymers*Number of molecules6
Total formula weight510.5
All*Total formula weight111702.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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