6V3D
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | 50S ribosomal protein L33 | polymer | 51 | 6105.3 | 1 | UniProt (N9PPR9) | Acinetobacter sp. CIP 51.11 | |
| 2 | B (1) | 50S ribosomal protein L34 | polymer | 44 | 5192.2 | 1 | UniProt (N9DYI8) Pfam (PF00468) | Acinetobacter beijerinckii ANC 3835 | |
| 3 | C (2) | 50S ribosomal protein L35 | polymer | 64 | 7424.1 | 1 | UniProt (B7I693) Pfam (PF01632) | Acinetobacter baumannii (strain AB0057) | |
| 4 | D (3) | 50S ribosomal protein L36 | polymer | 38 | 4276.2 | 1 | UniProt (A0A1Y3CHB1) Pfam (PF00444) | Acinetobacter sp. ANC 4470 | |
| 5 | E (AN1) | 23s ribosomal RNA | polymer | 2918 | 945299.3 | 1 | Acinetobacter baumannii AB0057 | ||
| 6 | F (B) | 5s ribosomal RNA | polymer | 115 | 36997.0 | 1 | GenBank (1360860747) | Acinetobacter baumannii | |
| 7 | G (C) | 50S ribosomal protein L2 | polymer | 274 | 30346.1 | 1 | UniProt (B7IA36) Pfam (PF00181) Pfam (PF03947) | Acinetobacter baumannii (strain AB0057) | |
| 8 | H (D) | 50S ribosomal protein L3 | polymer | 212 | 22512.6 | 1 | UniProt (B7IA39) Pfam (PF00297) | Acinetobacter baumannii (strain AB0057) | |
| 9 | I (E) | 50S ribosomal protein L4 | polymer | 200 | 21583.9 | 1 | UniProt (B7IA38) Pfam (PF00573) | Acinetobacter baumannii (strain AB0057) | |
| 10 | J (F) | 50S ribosomal protein L5 | polymer | 178 | 20051.5 | 1 | UniProt (B7IA27) Pfam (PF00281) Pfam (PF00673) | Acinetobacter baumannii (strain AB0057) | |
| 11 | K (G) | 50S ribosomal protein L6 | polymer | 177 | 19126.0 | 1 | UniProt (B7IA24) Pfam (PF00347) | Acinetobacter baumannii (strain AB0057) | |
| 12 | L (H) | 50S ribosomal protein L9 | polymer | 148 | 15801.0 | 1 | UniProt (B7IBC3) Pfam (PF01281) Pfam (PF03948) | Acinetobacter baumannii (strain AB0057) | |
| 13 | M (I) | 50S ribosomal protein L13 | polymer | 142 | 15981.5 | 1 | UniProt (B7I9B0) Pfam (PF00572) | Acinetobacter baumannii (strain AB0057) | |
| 14 | N (J) | 50S ribosomal protein L14 | polymer | 122 | 13523.9 | 1 | UniProt (N8WQT6) Pfam (PF00238) UniProt (by SIFTS) (N9NZ44) | Acinetobacter sp. NIPH 899 | |
| 15 | O (K) | 50S ribosomal protein L15 | polymer | 146 | 15509.9 | 1 | UniProt (B7IA20) Pfam (PF00828) | Acinetobacter baumannii (strain AB0057) | |
| 16 | P (L) | 50S ribosomal protein L16 | polymer | 137 | 15498.3 | 1 | UniProt (B7IA32) Pfam (PF00252) | Acinetobacter baumannii (strain AB0057) | |
| 17 | Q (M) | 50S ribosomal protein L17 | polymer | 125 | 14022.2 | 1 | UniProt (B7IA13) Pfam (PF01196) | Acinetobacter baumannii (strain AB0057) | |
| 18 | R (N) | 50S ribosomal protein L18 | polymer | 116 | 12443.3 | 1 | UniProt (B7IA23) Pfam (PF00861) | Acinetobacter baumannii (strain AB0057) | |
| 19 | S (O) | 50S ribosomal protein L19 | polymer | 122 | 13619.9 | 1 | UniProt (B7IAS9) Pfam (PF01245) | Acinetobacter baumannii (strain AB0057) | |
| 20 | T (P) | 50S ribosomal protein L20 | polymer | 119 | 13468.9 | 1 | UniProt (V5VGC9) Pfam (PF00453) | Acinetobacter baumannii | |
| 21 | U (Q) | 50S ribosomal protein L21 | polymer | 103 | 11496.4 | 1 | UniProt (B7I6V9) Pfam (PF00829) | Acinetobacter baumannii (strain AB0057) | |
| 22 | V (R) | 50S ribosomal protein L22 | polymer | 109 | 11828.9 | 1 | UniProt (A0A009QSN8) Pfam (PF00237) | Acinetobacter sp. 809848 | |
| 23 | W (S) | 50S ribosomal protein L23 | polymer | 106 | 11607.4 | 1 | UniProt (B7IA37) Pfam (PF00276) | Acinetobacter baumannii (strain AB0057) | |
| 24 | X (T) | 50S ribosomal protein L24 | polymer | 105 | 11187.9 | 1 | UniProt (B7IA28) Pfam (PF00467) Pfam (PF17136) | Acinetobacter baumannii (strain AB0057) | |
| 25 | Y (U) | 50S ribosomal protein L25 | polymer | 98 | 10942.6 | 1 | UniProt (B7I7B6) Pfam (PF01386) | Acinetobacter baumannii (strain AB0057) | |
| 26 | Z (V) | 50S ribosomal protein L27 | polymer | 85 | 9072.4 | 1 | UniProt (B7I6V8) Pfam (PF01016) | Acinetobacter baumannii (strain AB0057) | |
| 27 | AA (W) | 50S ribosomal protein L28 | polymer | 78 | 9125.8 | 1 | UniProt (S3NQR5) Pfam (PF00830) | Acinetobacter rudis CIP 110305 | |
| 28 | BA (X) | 50S ribosomal protein L29 | polymer | 65 | 7449.7 | 1 | UniProt (B7IA31) Pfam (PF00831) | Acinetobacter baumannii (strain AB0057) | |
| 29 | CA (Y) | 50S ribosomal protein L30 | polymer | 58 | 6654.8 | 1 | UniProt (N8V730) Pfam (PF00327) | Acinetobacter sp. CIP 102082 | |
| 30 | DA (Z) | 50S ribosomal protein L32 | polymer | 61 | 7096.9 | 1 | UniProt (B7I7A4) Pfam (PF01783) | Acinetobacter baumannii (strain AB0057) | |
| 31 | EA (3) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 32 | AB, AC, AD, AE, BB... (AN1, C) | MAGNESIUM ION | non-polymer | 24.3 | 106 | Chemie (MG) | |||
| 33 | FE (AN1) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 34 | IE, JE, KE, LE, ME... (1, AN1, B, C, D...) | water | water | 18.0 | 231 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 30 |
| Total formula weight | 1345245.9 | |
| Non-Polymers* | Number of molecules | 108 |
| Total formula weight | 2664.7 | |
| All* | Total formula weight | 1347910.6 |
