6UZ3
Cardiac sodium channel
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Sodium channel protein type 5 subunit alpha,Green fluorescent protein | polymer | 1838 | 209037.8 | 1 | UniProt (P15389) UniProt (P42212) Pfam (PF00520) Pfam (PF06512) Pfam (PF01353) In PDB | Rattus norvegicus (Rat) | Sodium channel protein cardiac muscle subunit alpha,Sodium channel protein type V subunit alpha,Voltage-gated sodium channel subunit alpha Nav1.5 |
2 | B, D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
3 | C | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
4 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
5 | A | (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en | non-polymer | 544.8 | 5 | Chemie (9Z9) | |||
6 | A | [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate | non-polymer | 718.0 | 11 | Chemie (6OU) |
Sequence modifications
A: 1 - 1898 (UniProt: P15389)
A: 1910 - 2146 (UniProt: P42212)
PDB | External Database | Details |
---|---|---|
- | Leu 462 | deletion |
- | Glu 463 | deletion |
- | Met 464 | deletion |
- | Ser 465 | deletion |
- | Pro 466 | deletion |
- | Leu 467 | deletion |
- | Ala 468 | deletion |
- | Pro 469 | deletion |
- | Val 470 | deletion |
- | Thr 471 | deletion |
- | Asn 472 | deletion |
- | His 473 | deletion |
- | Glu 474 | deletion |
- | Arg 475 | deletion |
- | Lys 476 | deletion |
- | Ser 477 | deletion |
- | Lys 478 | deletion |
- | Arg 479 | deletion |
- | Arg 480 | deletion |
- | Lys 481 | deletion |
- | Arg 482 | deletion |
- | Leu 483 | deletion |
- | Ser 484 | deletion |
- | Ser 485 | deletion |
- | Gly 486 | deletion |
- | Thr 487 | deletion |
- | Glu 488 | deletion |
- | Asp 489 | deletion |
- | Gly 490 | deletion |
- | Gly 491 | deletion |
- | Asp 492 | deletion |
- | Asp 493 | deletion |
- | Arg 494 | deletion |
- | Leu 495 | deletion |
- | Pro 496 | deletion |
- | Lys 497 | deletion |
- | Ser 498 | deletion |
- | Asp 499 | deletion |
- | Ser 500 | deletion |
- | Glu 501 | deletion |
- | Asp 502 | deletion |
- | Gly 503 | deletion |
- | Pro 504 | deletion |
- | Arg 505 | deletion |
- | Ala 506 | deletion |
- | Leu 507 | deletion |
- | Asn 508 | deletion |
- | Gln 509 | deletion |
- | Leu 510 | deletion |
- | Ser 511 | deletion |
- | Leu 512 | deletion |
- | Thr 513 | deletion |
- | His 514 | deletion |
- | Gly 515 | deletion |
- | Leu 516 | deletion |
- | Ser 517 | deletion |
- | Arg 518 | deletion |
- | Thr 519 | deletion |
- | Ser 520 | deletion |
- | Met 521 | deletion |
- | Arg 522 | deletion |
- | Pro 523 | deletion |
- | Arg 524 | deletion |
- | Ser 525 | deletion |
- | Ser 526 | deletion |
- | Arg 527 | deletion |
- | Gly 528 | deletion |
- | Ser 529 | deletion |
- | Ile 530 | deletion |
- | Phe 531 | deletion |
- | Thr 532 | deletion |
- | Phe 533 | deletion |
- | Arg 534 | deletion |
- | Arg 535 | deletion |
- | Arg 536 | deletion |
- | Asp 537 | deletion |
- | Gln 538 | deletion |
- | Gly 539 | deletion |
- | Ser 540 | deletion |
- | Glu 541 | deletion |
- | Ala 542 | deletion |
- | Asp 543 | deletion |
- | Phe 544 | deletion |
- | Ala 545 | deletion |
- | Asp 546 | deletion |
- | Asp 547 | deletion |
- | Glu 548 | deletion |
- | Asn 549 | deletion |
- | Ser 550 | deletion |
- | Thr 551 | deletion |
- | Ala 552 | deletion |
- | Gly 553 | deletion |
- | Glu 554 | deletion |
- | Ser 555 | deletion |
- | Glu 556 | deletion |
- | Ser 557 | deletion |
- | His 558 | deletion |
- | Arg 559 | deletion |
- | Thr 560 | deletion |
- | Ser 561 | deletion |
- | Leu 562 | deletion |
- | Leu 563 | deletion |
- | Val 564 | deletion |
- | Pro 565 | deletion |
- | Trp 566 | deletion |
- | Pro 567 | deletion |
- | Leu 568 | deletion |
- | Arg 569 | deletion |
- | His 570 | deletion |
- | Pro 571 | deletion |
- | Ser 572 | deletion |
- | Ala 573 | deletion |
- | Gln 574 | deletion |
- | Gly 575 | deletion |
- | Gln 576 | deletion |
- | Pro 577 | deletion |
- | Gly 578 | deletion |
- | Pro 579 | deletion |
- | Gly 580 | deletion |
- | Ala 581 | deletion |
- | Ser 582 | deletion |
- | Ala 583 | deletion |
- | Pro 584 | deletion |
- | Gly 585 | deletion |
- | Tyr 586 | deletion |
- | Val 587 | deletion |
- | Leu 588 | deletion |
- | Asn 589 | deletion |
- | Gly 590 | deletion |
- | Lys 591 | deletion |
- | Arg 592 | deletion |
- | Asn 593 | deletion |
- | Ser 594 | deletion |
- | Thr 595 | deletion |
- | Val 596 | deletion |
- | Asp 597 | deletion |
- | Cys 598 | deletion |
- | Asn 599 | deletion |
- | Gly 600 | deletion |
- | Val 601 | deletion |
- | Val 602 | deletion |
- | Ser 603 | deletion |
- | Leu 604 | deletion |
- | Leu 605 | deletion |
- | Gly 606 | deletion |
- | Ala 607 | deletion |
- | Gly 608 | deletion |
- | Asp 609 | deletion |
- | Ala 610 | deletion |
- | Glu 611 | deletion |
- | Ala 612 | deletion |
- | Thr 613 | deletion |
- | Ser 614 | deletion |
- | Pro 615 | deletion |
- | Gly 616 | deletion |
- | Ser 617 | deletion |
- | Tyr 618 | deletion |
- | Leu 619 | deletion |
- | Leu 620 | deletion |
- | Arg 621 | deletion |
- | Pro 622 | deletion |
- | Met 623 | deletion |
- | Val 624 | deletion |
- | Leu 625 | deletion |
- | Asp 626 | deletion |
- | Arg 627 | deletion |
- | Pro 628 | deletion |
- | Pro 629 | deletion |
- | Asp 630 | deletion |
- | Thr 631 | deletion |
- | Thr 632 | deletion |
- | Thr 633 | deletion |
- | Pro 634 | deletion |
- | Ser 635 | deletion |
- | Glu 636 | deletion |
- | Glu 637 | deletion |
- | Pro 638 | deletion |
- | Gly 639 | deletion |
- | Gly 640 | deletion |
- | Pro 641 | deletion |
- | Gln 642 | deletion |
- | Met 643 | deletion |
- | Leu 644 | deletion |
- | Thr 645 | deletion |
- | Pro 646 | deletion |
- | Gln 647 | deletion |
- | Ala 648 | deletion |
- | Pro 649 | deletion |
- | Cys 650 | deletion |
- | Ala 651 | deletion |
- | Asp 652 | deletion |
- | Gly 653 | deletion |
- | Phe 654 | deletion |
- | Glu 655 | deletion |
- | Glu 656 | deletion |
- | Pro 657 | deletion |
- | Gly 658 | deletion |
- | Ser 1069 | deletion |
- | Leu 1070 | deletion |
- | Gly 1071 | deletion |
- | Thr 1072 | deletion |
- | Glu 1073 | deletion |
- | Glu 1074 | deletion |
- | Glu 1075 | deletion |
- | Ser 1076 | deletion |
- | Ser 1077 | deletion |
- | Lys 1078 | deletion |
- | Gln 1079 | deletion |
- | Glu 1080 | deletion |
- | Ser 1081 | deletion |
- | Gln 1082 | deletion |
- | Val 1083 | deletion |
- | Val 1084 | deletion |
- | Ser 1085 | deletion |
- | Gly 1086 | deletion |
- | Gly 1087 | deletion |
- | His 1088 | deletion |
- | Glu 1089 | deletion |
- | Pro 1090 | deletion |
- | Tyr 1091 | deletion |
- | Gln 1092 | deletion |
- | Glu 1093 | deletion |
- | Pro 1094 | deletion |
- | Arg 1095 | deletion |
- | Ala 1096 | deletion |
- | Trp 1097 | deletion |
- | Ser 1098 | deletion |
- | Gln 1099 | deletion |
- | Val 1100 | deletion |
- | Ser 1101 | deletion |
- | Glu 1102 | deletion |
- | Thr 1103 | deletion |
- | Thr 1104 | deletion |
- | Ser 1105 | deletion |
- | Ser 1106 | deletion |
- | Glu 1107 | deletion |
- | Ala 1108 | deletion |
- | Gly 1109 | deletion |
- | Ala 1110 | deletion |
- | Ser 1111 | deletion |
- | Thr 1112 | deletion |
- | Ser 1113 | deletion |
- | Gln 1114 | deletion |
- | Ala 1115 | deletion |
- | Asp 1116 | deletion |
- | Trp 1117 | deletion |
- | Gln 1118 | deletion |
- | Gln 1119 | deletion |
- | Glu 1120 | deletion |
- | Gln 1121 | deletion |
- | Lys 1122 | deletion |
- | Thr 1123 | deletion |
- | Glu 1124 | deletion |
- | Pro 1125 | deletion |
- | Gln 1126 | deletion |
- | Ala 1127 | deletion |
- | Pro 1128 | deletion |
- | Gly 1129 | deletion |
- | Cys 1130 | deletion |
- | Gly 1131 | deletion |
- | Glu 1132 | deletion |
- | Thr 1133 | deletion |
- | Pro 1134 | deletion |
- | Glu 1135 | deletion |
- | Asp 1136 | deletion |
- | Ser 1137 | deletion |
- | Tyr 1138 | deletion |
- | Ser 1139 | deletion |
- | Glu 1140 | deletion |
- | Gly 1141 | deletion |
- | Ser 1142 | deletion |
- | Thr 1143 | deletion |
- | Ala 1144 | deletion |
- | Asp 1145 | deletion |
- | Met 1146 | deletion |
- | Thr 1147 | deletion |
- | Asn 1148 | deletion |
- | Thr 1149 | deletion |
- | Ala 1150 | deletion |
- | Asp 1151 | deletion |
- | Leu 1152 | deletion |
- | Leu 1153 | deletion |
- | Glu 1154 | deletion |
- | Gln 1155 | deletion |
- | Ile 1156 | deletion |
- | Pro 1157 | deletion |
- | Asp 1158 | deletion |
- | Leu 1159 | deletion |
- | Gly 1160 | deletion |
- | Glu 1161 | deletion |
- | Asp 1162 | deletion |
- | Val 1163 | deletion |
- | Lys 1164 | deletion |
- | Asp 1165 | deletion |
- | Pro 1166 | deletion |
- | Glu 1167 | deletion |
- | Asp 1168 | deletion |
- | Cys 1169 | deletion |
- | Phe 1170 | deletion |
- | Thr 1171 | deletion |
- | Glu 1172 | deletion |
- | Gly 1173 | deletion |
- | Cys 1174 | deletion |
- | Val 1175 | deletion |
- | Arg 1176 | deletion |
- | Arg 1177 | deletion |
- | Cys 1178 | deletion |
- | Pro 1179 | deletion |
- | Cys 1180 | deletion |
- | Cys 1181 | deletion |
- | Met 1182 | deletion |
- | Val 1183 | deletion |
- | Asp 1184 | deletion |
- | Thr 1185 | deletion |
- | Thr 1186 | deletion |
- | Gln 1187 | deletion |
- | Ser 1188 | deletion |
- | Pro 1189 | deletion |
Glu 1899 | - | linker |
Val 1900 | - | linker |
Leu 1901 | - | linker |
Phe 1902 | - | linker |
Gln 1903 | - | linker |
Gly 1904 | - | linker |
Pro 1905 | - | linker |
Gly 1906 | - | linker |
Ser 1907 | - | linker |
Met 1908 | - | linker |
Val 1909 | - | linker |
PDB | External Database | Details |
---|---|---|
Leu 1972 | Phe 64 | conflict |
Thr 1973 | Ser 65 | conflict |
Leu 2139 | His 231 | conflict |
Gly 2147 | - | expression tag |
Ser 2148 | - | expression tag |
Asp 2149 | - | expression tag |
Tyr 2150 | - | expression tag |
Lys 2151 | - | expression tag |
Asp 2152 | - | expression tag |
Asp 2153 | - | expression tag |
Asp 2154 | - | expression tag |
Asp 2155 | - | expression tag |
Lys 2156 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 209037.8 | |
Branched | Number of molecules | 3 |
Total formula weight | 1435.3 | |
Non-Polymers* | Number of molecules | 18 |
Total formula weight | 11064.4 | |
All* | Total formula weight | 221537.5 |