6ULC
Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab at a nominal resolution of 4.6 Angstrom
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, C, E) | envelope glycoprotein gp120,envelope glycoprotein gp120 | polymer | 505 | 57173.9 | 3 | UniProt (Q71014) Pfam (PF00516) | Human immunodeficiency virus 1 (HIV-1) | |
| 2 | B, D, F (B, D, F) | Envelope glycoprotein gp41 | polymer | 353 | 40404.6 | 3 | UniProt (Q71014) Pfam (PF00517) | Human immunodeficiency virus 1 (HIV-1) | |
| 3 | G (H) | antibody PG16 Fab heavy chain | polymer | 297 | 31952.7 | 1 | Homo sapiens (Human) | ||
| 4 | H (L) | antibody PG16 Fab light chain | polymer | 250 | 26424.2 | 1 | Homo sapiens (Human) | ||
| 5 | I (G) | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1114.0 | 1 | In PDB GlyTouCan (G08429SS) | |||
| 6 | J, K (I, J) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 2 | In PDB GlyTouCan (G22768VO) | |||
| 7 | CA, DA, EA, FA, GA... (c, d, e, f, g...) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 16 | In PDB GlyTouCan (G15407YE) | |||
| 8 | BA, HA, LA, M, O... (b, h, l, M, O...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 10 | In PDB GlyTouCan (G42666HT) | |||
| 9 | T (T) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 10 | AA (a) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 1 | In PDB GlyTouCan (G55220VL) | |||
| 11 | MA (m) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 12 | AB, AC, BB, BC, CB... (A, E, F, B, C...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 44 | Chemie (NAG) |
Sequence modifications
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 351112.6 | |
| Branched | Number of molecules | 32 |
| Total formula weight | 19102.7 | |
| Non-Polymers* | Number of molecules | 44 |
| Total formula weight | 9733.2 | |
| All* | Total formula weight | 379948.5 |
